Adamo Young

According to our database, Adamo Young authored at least 11 papers between 2020 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2025

ChemPile: A 250GB Diverse and Curated Dataset for Chemical Foundation Models.

Adrian Mirza, Nawaf Alampara, Martiño Ríos-García, Mohamed Abdelalim, Jack Butler, Bethany Connolly, Tunca Dogan, Marianna Nezhurina, Bünyamin Sen, Santosh Tirunagari, Mark Worrall, Adamo Young, Philippe Schwaller, Michael Pieler, Kevin Maik Jablonka

CoRR, May, 2025

FraGNNet: A Deep Probabilistic Model for Tandem Mass Spectrum Prediction.

Adamo Young, Fei Wang, David S. Wishart, Bo Wang, Russell Greiner, Hannes Rost

Trans. Mach. Learn. Res., 2025

2024

Tandem mass spectrum prediction for small molecules using graph transformers.

Adamo Young, Hannes L. Röst, Bo Wang

Nat. Mac. Intell., 2024

FraGNNet: A Deep Probabilistic Model for Mass Spectrum Prediction.

Adamo Young, Fei Wang, David S. Wishart, Bo Wang, Hannes L. Röst, Russ Greiner

CoRR, 2024

MassSpecGym: A benchmark for the discovery and identification of molecules.

Roman Bushuiev, Anton Bushuiev, Niek F. de Jonge, Adamo Young, Fleming Kretschmer, Raman Samusevich, Janne Heirman, Fei Wang, Luke Zhang, Kai Dührkop, Marcus Ludwig, Nils A. Haupt, Apurva Kalia, Corinna Brungs, Robin Schmid, Russell Greiner, Bo Wang, David S. Wishart, Liping Liu, Juho Rousu, Wout Bittremieux, Hannes Rost, Tytus D. Mak, Soha Hassoun, Florian Huber, Justin J. J. van der Hooft, Michael A. Stravs, Sebastian Böcker, Josef Sivic, Tomás Pluskal

Proceedings of the Advances in Neural Information Processing Systems 38: Annual Conference on Neural Information Processing Systems 2024, 2024

2023

Unleashing the Strengths of Unlabeled Data in Pan-cancer Abdominal Organ Quantification: the FLARE22 Challenge.

Jun Ma, Yao Zhang, Song Gu, Cheng Ge, Shihao Ma, Adamo Young, Cheng Zhu, Kangkang Meng, Xin Yang, Ziyan Huang, Fan Zhang, Wentao Liu, YuanKe Pan, Shoujin Huang, Jiacheng Wang, Mingze Sun, Weixin Xu, Dengqiang Jia, Jae Won Choi, Natália Alves, Bram De Wilde, Gregor Köhler, Yajun Wu, Manuel Wiesenfarth, Qiongjie Zhu, Guoqiang Dong, Jian He, FLARE Challenge Consortium, Bo Wang

CoRR, 2023

2022

SELFIES and the future of molecular string representations.

Mario Krenn, Qianxiang Ai, Senja Barthel, Nessa Carson, Angelo Frei, Nathan C. Frey, Pascal Friederich, Théophile Gaudin, Alberto Alexander Gayle, Kevin Maik Jablonka, Rafael F. Lameiro, Dominik Lemm, Alston Lo, Seyed Mohamad Moosavi, José Manuel Nápoles-Duarte, AkshatKumar Nigam, Robert Pollice, Kohulan Rajan, Ulrich Schatzschneider, Philippe Schwaller, Marta Skreta, Berend Smit, Felix Strieth-Kalthoff, Chong Sun, Gary Tom, Guido Falk von Rudorff, Andrew Wang, Andrew D. White, Adamo Young, Rose Yu, Alán Aspuru-Guzik

Patterns, 2022

A graph neural network approach for molecule carcinogenicity prediction.

Philip Fradkin, Adamo Young, Lazar Atanackovic, Brendan J. Frey, Leo J. Lee, Bo Wang

Bioinform., 2022

2021

Supervised topic modeling for predicting molecular substructure from mass spectrometry.

Gabriel Reder, Adamo Young, Jaan Altosaar, Jakub Rajniak, Noémie Elhadad, Michael Fischbach, Susan Holmes

F1000Research, 2021

MassFormer: Tandem Mass Spectrum Prediction with Graph Transformers.

Adamo Young, Bo Wang, Hannes L. Röst

CoRR, 2021

2020

Genome Gerrymandering: Optimal Division of the Genome into Regions with Cancer Type SpecificDifferences in Mutation Rates.

Adamo Young, Jacob Chmura, Yoon-Sik Park, Quaid Morris, Gurnit Atwal

Proceedings of the Pacific Symposium on Biocomputing 2020, 2020