Agnieszka Debudaj-Grabysz

According to our database, Agnieszka Debudaj-Grabysz authored at least 13 papers between 2002 and 2019.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2019

CoMSA: compression of protein multiple sequence alignment files.

Sebastian Deorowicz, Joanna Walczyszyn, Agnieszka Debudaj-Grabysz

Bioinform., 2019

Whisper: read sorting allows robust mapping of DNA sequencing data.

Sebastian Deorowicz, Agnieszka Debudaj-Grabysz, Adam Gudys, Szymon Grabowski

Bioinform., 2019

2017

Sorting Data on Ultra-Large Scale with RADULS - New Incarnation of Radix Sort.

Marek Kokot, Sebastian Deorowicz, Agnieszka Debudaj-Grabysz

Proceedings of the Beyond Databases, Architectures and Structures. Towards Efficient Solutions for Data Analysis and Knowledge Representation, 2017

2016

Aligning 415 519 proteins in less than two hours on PC.

Sebastian Deorowicz, Agnieszka Debudaj-Grabysz, Adam Gudys

CoRR, 2016

2015

KMC 2: fast and resource-frugal <i>k</i>-mer counting.

Sebastian Deorowicz, Marek Kokot, Szymon Grabowski, Agnieszka Debudaj-Grabysz

Bioinform., 2015

2014

KMC 2: Fast and resource-frugal k-mer counting.

Sebastian Deorowicz, Marek Kokot, Szymon Grabowski, Agnieszka Debudaj-Grabysz

CoRR, 2014

2013

Disk-based k-mer counting on a PC.

Sebastian Deorowicz, Agnieszka Debudaj-Grabysz, Szymon Grabowski

BMC Bioinform., 2013

Kalign-LCS - A More Accurate and Faster Variant of Kalign2 Algorithm for the Multiple Sequence Alignment Problem.

Sebastian Deorowicz, Agnieszka Debudaj-Grabysz, Adam Gudys

Proceedings of the Man-Machine Interactions 3, 2013

2007

Theoretical and Practical Issues of Parallel Simulated Annealing.

Agnieszka Debudaj-Grabysz, Zbigniew J. Czech

Proceedings of the Parallel Processing and Applied Mathematics, 2007

2006

Load Balanced Parallel Simulated Annealing on a Cluster of SMP Nodes.

Agnieszka Debudaj-Grabysz, Rolf Rabenseifner

Proceedings of the Euro-Par 2006, Parallel Processing, 12th International Euro-Par Conference, Dresden, Germany, August 28, 2006

2005

Nesting OpenMP in MPI to Implement a Hybrid Communication Method of Parallel Simulated Annealing on a Cluster of SMP Nodes.

Agnieszka Debudaj-Grabysz, Rolf Rabenseifner

Proceedings of the Recent Advances in Parallel Virtual Machine and Message Passing Interface, 2005

2004

A Concurrent Implementation of Simulated Annealing and its Application to the VRPTW Optimization Problem.

Agnieszka Debudaj-Grabysz, Zbigniew J. Czech

Proceedings of the Distributed and Parallel Systems: Cluster and Grid Computing (DAPSYS 2004, 2004

2002

A concurrent implementation of the simulated annealing by the method of multiple trials.

Agnieszka Debudaj-Grabysz

Informatica (Slovenia), 2002