Alan R. Bishop

According to our database1, Alan R. Bishop authored at least 18 papers between 1998 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2023
Examining DNA breathing with pyDNA-EPBD.
Bioinform., October, 2023

2020
A Recursive Algebraic Coloring Technique for Hardware-efficient Symmetric Sparse Matrix-vector Multiplication.
ACM Trans. Parallel Comput., 2020

Understanding HPC Benchmark Performance on Intel Broadwell and Cascade Lake Processors.
Proceedings of the High Performance Computing - 35th International Conference, 2020

2018
Chebyshev Filter Diagonalization on Modern Manycore Processors and GPGPUs.
CoRR, 2018

Chebyshev Filter Diagonalization on Modern Manycore Processors and GPGPUs.
Proceedings of the High Performance Computing - 33rd International Conference, 2018

2016
Performance Engineering and Energy Efficiency of Building Blocks for Large, Sparse Eigenvalue Computations on Heterogeneous Supercomputers.
Proceedings of the Software for Exascale Computing - SPPEXA 2013-2015, 2016

The role of structural parameters in DNA cyclization.
BMC Bioinform., 2016

2014
A Unified Sparse Matrix Data Format for Efficient General Sparse Matrix-Vector Multiplication on Modern Processors with Wide SIMD Units.
SIAM J. Sci. Comput., 2014

Non-Hermitian quantum annealing in the antiferromagnetic Ising chain.
Quantum Inf. Process., 2014

2013
Binding of Nucleoid-Associated Protein Fis to DNA Is Regulated by DNA Breathing Dynamics.
PLoS Comput. Biol., 2013

A unified sparse matrix data format for modern processors with wide SIMD units.
CoRR, 2013

2012
Sparse Matrix-vector Multiplication on GPGPU Clusters: A New Storage Format and a Scalable Implementation.
Proceedings of the 26th IEEE International Parallel and Distributed Processing Symposium Workshops & PhD Forum, 2012

2009
Toward a Detailed Description of the Thermally Induced Dynamics of the Core Promoter.
PLoS Comput. Biol., 2009

2007
Modelling the magnetic signature of neuronal tissue.
NeuroImage, 2007

Asymptotic calculation of discrete non-linear wave interactions.
Math. Comput. Simul., 2007

Soliton trains and vortex streets as a form of Cerenkov radiation in trapped Bose-Einstein condensates.
Math. Comput. Simul., 2007

2005
Domain walls of single-component Bose-Einstein condensates in external potentials.
Math. Comput. Simul., 2005

1998
Collective Coordinates and Length-Scale Competition in Spatially Inhomogeneous Soliton-Bearing Equations.
SIAM Rev., 1998


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