Alessandro Paiardini

According to our database, Alessandro Paiardini authored at least 9 papers between 2005 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2026

A deep learning framework for comprehensive prediction of human RNA G-quadruplex-binding proteins.

Serena Rosignoli, Sophie Taraglio, Francesco Di Luzio, Elisa Lustrino, Dario F. Marzella, Arne Elofsson, Massimo Panella, Alessandro Paiardini

Bioinform., 2026

2023

PyPCN: protein contact networks in PyMOL.

Serena Rosignoli, Luisa di Paola, Alessandro Paiardini

Bioinform., October, 2023

A Deep Neural Network for G-Quadruplexes Binding Proteins Classification.

Francesco Di Luzio, Alessandro Paiardini, Federica Colonnese, Antonello Rosato, Massimo Panella

Proceedings of the Advances in Computational Intelligence, 2023

2022

DockingPie: a consensus docking plugin for PyMOL.

Serena Rosignoli, Alessandro Paiardini

Bioinform., 2022

2021

PyMod 3: a complete suite for structural bioinformatics in PyMOL.

Giacomo Janson, Alessandro Paiardini

Bioinform., 2021

2019

Revisiting the "satisfaction of spatial restraints" approach of MODELLER for protein homology modeling.

Giacomo Janson, Alessandro Grottesi, Marco Pietrosanto, Gabriele Ausiello, Giulia Guarguaglini, Alessandro Paiardini

PLoS Comput. Biol., 2019

2017

PyMod 2.0: improvements in protein sequence-structure analysis and homology modeling within PyMOL.

Giacomo Janson, Chengxin Zhang, Maria Giulia Prado, Alessandro Paiardini

Bioinform., 2017

2012

PyMod: sequence similarity searches, multiple sequence-structure alignments, and homology modeling within PyMOL.

Emanuele Bramucci, Alessandro Paiardini, Francesco Bossa, Stefano Pascarella

BMC Bioinform., 2012

2005

CAMPO, SCR_FIND and CHC_FIND: a suite of web tools for computational structural biology.

Alessandro Paiardini, Francesco Bossa, Stefano Pascarella

Nucleic Acids Res., 2005