Arne Elofsson
Orcid: 0000-0002-7115-9751Affiliations:
- Stockholm University, Sweden
According to our database1,
Arne Elofsson
authored at least 55 papers
between 1999 and 2024.
Collaborative distances:
Collaborative distances:
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Bibliography
2024
M-Ionic: prediction of metal-ion-binding sites from sequence using residue embeddings.
Bioinform., January, 2024
2023
AFTGAN: prediction of multi-type PPI based on attention free transformer and graph attention network.
Bioinform., February, 2023
2022
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation.
Nucleic Acids Res., 2022
2021
PLoS Comput. Biol., 2021
GCSENet: A GCN, CNN and SENet ensemble model for microRNA-disease association prediction.
PLoS Comput. Biol., 2021
Accurate contact-based modelling of repeat proteins predicts the structure of new repeats protein families.
PLoS Comput. Biol., 2021
CoRR, 2021
pyconsFold: a fast and easy tool for modeling and docking using distance predictions.
Bioinform., 2021
Bioinform., 2021
2020
TransformerCPI: improving compound-protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments.
Bioinform., 2020
2019
Ten simple rules on how to create open access and reproducible molecular simulations of biological systems.
PLoS Comput. Biol., 2019
PLoS Comput. Biol., 2019
2017
PLoS Comput. Biol., 2017
Nucleic Acids Res., 2017
SubCons: a new ensemble method for improved human subcellular localization predictions.
Bioinform., 2017
Bioinform., 2017
Large-scale structure prediction by improved contact predictions and model quality assessment.
Bioinform., 2017
Bioinform., 2017
2016
PRED-TMBB2: improved topology prediction and detection of beta-barrel outer membrane proteins.
Bioinform., 2016
Bioinform., 2016
Inclusion of dyad-repeat pattern improves topology prediction of transmembrane β-barrel proteins.
Bioinform., 2016
2015
The TOPCONS web server for consensus prediction of membrane protein topology and signal peptides.
Nucleic Acids Res., 2015
2014
PLoS Comput. Biol., 2014
2013
PconsD: ultra rapid, accurate model quality assessment for protein structure prediction.
Bioinform., 2013
PconsC: combination of direct information methods and alignments improves contact prediction.
Bioinform., 2013
2012
Ranking models of transmembrane <i>β</i>-barrel proteins using Z-coordinate predictions.
Bioinform., 2012
Bioinform., 2012
2011
KalignP: Improved multiple sequence alignments using position specific gap penalties in Kalign2.
Bioinform., 2011
2010
MPRAP: An accessibility predictor for alpha-helical transmembrane proteins that performs well inside and outside the membrane.
BMC Bioinform., 2010
2009
2008
OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar.
Bioinform., 2008
Bioinform., 2008
2007
2006
Nucleic Acids Res., 2006
Improved alignment quality by combining evolutionary information, predicted secondary structure and self-organizing maps.
BMC Bioinform., 2006
ZPRED: Predicting the distance to the membrane center for residues in alpha-helical membrane proteins.
Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006
2005
ProfNet, a method to derive profile-profile alignment scoring functions that improves the alignments of distantly related proteins.
BMC Bioinform., 2005
Bioinform., 2005
2003
Bioinform., 2003
2002
2001
Proceedings of the Algorithms in Bioinformatics, First International Workshop, 2001
2000
MaxSub: an automated measure for the assessment of protein structure prediction quality.
Bioinform., 2000
1999
A comparison of sequence and structure protein domain families as a basis for structural genomics.
Bioinform., 1999