Alexis Dereeper

According to our database, Alexis Dereeper authored at least 8 papers between 2007 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

getSequenceInfo: a suite of tools allowing to get genome sequence information from public repositories.

Vincent Moco, Damien Cazenave, Maëlle Garnier, Matthieu Pot, Isabel Marcelino, Antoine Talarmin, Stéphanie Guyomard-Rabenirina, Sébastien Breurec, Séverine Ferdinand, Alexis Dereeper, Yann Reynaud, David Couvin

BMC Bioinform., 2022

PanExplorer: a web-based tool for exploratory analysis and visualization of bacterial pan-genomes.

Alexis Dereeper, Marilyne Summo, Damien F. Meyer

Bioinform., 2022

2015

SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations.

Alexis Dereeper, Felix Homa, Gwendoline Andres, Guilhem Sempéré, Gautier Sarah, Yann Hueber, Jean-François Dufayard, Manuel Ruiz

Nucleic Acids Res., 2015

The coffee genome hub: a resource for coffee genomes.

Alexis Dereeper, Stéphanie Bocs, Mathieu Rouard, Valentin Guignon, Sébastien Ravel, Christine Tranchant-Dubreuil, Valérie Poncet, Olivier Garsmeur, Philippe Lashermes, Gaëtan Droc

Nucleic Acids Res., 2015

2013

The Banana Genome Hub.

Gaëtan Droc, Delphine Larivière, Valentin Guignon, Nabila Yahiaoui, Dominique This, Olivier Garsmeur, Alexis Dereeper, Chantal Hamelin, Xavier Argout, Jean-François Dufayard, Juliette Lengelle, Franc-Christophe Baurens, Alberto Cenci, Bertrand Pitollat, Angélique D'Hont, Manuel Ruiz, Mathieu Rouard, Stéphanie Bocs

Database J. Biol. Databases Curation, 2013

2011

SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine diversity projects.

Alexis Dereeper, Stéphane Nicolas, Loic Le Cunff, Roberto Bacilieri, Agnes Doligez, Jean-Pierre Peros, Manuel Ruiz, Patrice This

BMC Bioinform., 2011

2008

Phylogeny.fr: robust phylogenetic analysis for the non-specialist.

Alexis Dereeper, Valentin Guignon, Guillaume Blanc, Stéphane Audic, S. Buffet, François Chevenet, Jean-François Dufayard, Stéphane Guindon, Vincent Lefort, Magali Lescot, Jean-Michel Claverie, Olivier Gascuel

Nucleic Acids Res., 2008

2007

SAT, a flexible and optimized Web application for SSR marker development.

Alexis Dereeper, Xavier Argout, Claire Billot, Jean-François Rami, Manuel Ruiz

BMC Bioinform., 2007