Andrea M. Rocha

According to our database, Andrea M. Rocha authored at least 7 papers between 2010 and 2012.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2012

NIBBS-Search for Fast and Accurate Prediction of Phenotype-Biased Metabolic Systems.

Matthew C. Schmidt, Andrea M. Rocha, Kanchana Padmanabhan, Yekaterina Shpanskaya, Jillian F. Banfield, Kathleen Scott, James R. Mihelcic, Nagiza F. Samatova

PLoS Comput. Biol., 2012

Spice: discovery of phenotype-determining component interplays.

Zhengzhang Chen, Kanchana Padmanabhan, Andrea M. Rocha, Yekaterina Shpanskaya, James R. Mihelcic, Kathleen Scott, Nagiza F. Samatova

BMC Syst. Biol., 2012

2011

DENSE: efficient and prior knowledge-driven discovery of phenotype-associated protein functional modules.

William Hendrix, Andrea M. Rocha, Kanchana Padmanabhan, Alok N. Choudhary, Kathleen Scott, James R. Mihelcic, Nagiza F. Samatova

BMC Syst. Biol., 2011

Efficient alpha, beta-motif Finder for Identification of Phenotype-related Functional Modules.

Matthew C. Schmidt, Andrea M. Rocha, Kanchana Padmanabhan, Zhengzhang Chen, Kathleen Scott, James R. Mihelcic, Nagiza F. Samatova

BMC Bioinform., 2011

Detecting Pathway Cross-Talks by Analyzing Conserved Functional Modules across Multiple Phenotype-Expressing Organisms.

Kevin A. Wilson, Andrea M. Rocha, Kanchana Padmanabhan, Kuangyu Wang, Zhengzhang Chen, Ye Jin, James R. Mihelcic, Nagiza F. Samatova

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011

2010

The Multiple Alignment Algorithm for Metabolic Pathways without Abstraction.

Wenbin Chen, Andrea M. Rocha, William Hendrix, Matthew C. Schmidt, Nagiza F. Samatova

Proceedings of the ICDMW 2010, 2010

Discovery of Enriched Biological Motifs Using Knowledge Priors with Application to Biohydrogen Production.

William Hendrix, Andrea M. Rocha, Mark T. Elmore, Joe Trien, Nagiza F. Samatova

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2010