Carlos J. Camacho

According to our database, Carlos J. Camacho authored at least 22 papers between 2003 and 2018.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2018

Predicting protein targets for drug-like compounds using transcriptomics.

Nicolas A. Pabon, Yan Xia, Samuel K. Estabrooks, Zhaofeng Ye, Amanda K. Herbrand, Evelyn Süß, Ricardo M. Biondi, Victoria A. Assimon, Jason E. Gestwicki, Jeffrey L. Brodsky, Carlos J. Camacho, Ziv Bar-Joseph

PLoS Comput. Biol., 2018

Optimal affinity ranking for automated virtual screening validated in prospective D3R grand challenges.

Bentley M. Wingert, Rick Oerlemans, Carlos J. Camacho

J. Comput. Aided Mol. Des., 2018

2016

Choosing the Optimal Rigid Receptor for Docking and Scoring in the CSAR 2013/2014 Experiment.

Matthew P. Baumgartner, Carlos J. Camacho

J. Chem. Inf. Model., 2016

Optimal strategies for virtual screening of induced-fit and flexible target in the 2015 D3R Grand Challenge.

Zhaofeng Ye, Matthew P. Baumgartner, Bentley M. Wingert, Carlos J. Camacho

J. Comput. Aided Mol. Des., 2016

2015

Indexing volumetric shapes with matching and packing.

David Ryan Koes, Carlos J. Camacho

Knowl. Inf. Syst., 2015

2014

Shape-based virtual screening with volumetric aligned molecular shapes.

David Ryan Koes, Carlos J. Camacho

J. Comput. Chem., 2014

2013

Lessons Learned in Empirical Scoring with smina from the CSAR 2011 Benchmarking Exercise.

David Ryan Koes, Matthew P. Baumgartner, Carlos J. Camacho

J. Chem. Inf. Model., 2013

2012

ZINCPharmer: pharmacophore search of the ZINC database.

David Ryan Koes, Carlos J. Camacho

Nucleic Acids Res., 2012

PocketQuery: protein-protein interaction inhibitor starting points from protein-protein interaction structure.

David Ryan Koes, Carlos J. Camacho

Nucleic Acids Res., 2012

Small-molecule inhibitor starting points learned from protein-protein interaction inhibitor structure.

David Ryan Koes, Carlos J. Camacho

Bioinform., 2012

2011

Pharmer: Efficient and Exact Pharmacophore Search.

David Ryan Koes, Carlos J. Camacho

J. Chem. Inf. Model., 2011

2010

ANCHOR: a web server and database for analysis of protein-protein interaction binding pockets for drug discovery.

Lidio M. C. Meireles, Alexander S. Dömling, Carlos J. Camacho

Nucleic Acids Res., 2010

Optimization of minimum set of protein-DNA interactions: a quasi exact solution with minimum over-fitting.

N. A. Temiz, Andrew C. Trapp, Oleg A. Prokopyev, Carlos J. Camacho

Bioinform., 2010

2008

Structural and Thermodynamic Approach to Peptide Immunogenicity.

Carlos J. Camacho, Yasuhiro Katsumata, Dana P. Ascherman

PLoS Comput. Biol., 2008

2007

FastContact: a free energy scoring tool for protein-protein complex structures.

P. Christoph Champ, Carlos J. Camacho

Nucleic Acids Res., 2007

2005

FastContact: rapid estimate of contact and binding free energies.

Carlos J. Camacho, Chao Zhang

Bioinform., 2005

2004

Consensus alignment server for reliable comparative modeling with distant templates.

Jahnavi C. Prasad, Sandor Vajda, Carlos J. Camacho

Nucleic Acids Res., 2004

ClusPro: a fully automated algorithm for protein-protein docking.

Stephen R. Comeau, David W. Gatchell, Sandor Vajda, Carlos J. Camacho

Nucleic Acids Res., 2004

ClusPro: an automated docking and discrimination method for the prediction of protein complexes.

Stephen R. Comeau, David W. Gatchell, Sandor Vajda, Carlos J. Camacho

Bioinform., 2004

What Works (and What Doesn't) in Estimating the Change in Free Energy due to Point Mutations in the Protein Interior.

Marta Bueno, Carlos J. Camacho, Javier Sancho

Proceedings of the 5th Annual Spanish Bioinformatics Conference, Barcelona, Catalonia, 2004

2003

Consensus alignment for reliable framework prediction in homology modeling.

Jahnavi C. Prasad, Stephen R. Comeau, Sandor Vajda, Carlos J. Camacho

Bioinform., 2003

Homology Modeling of Proteins Using Multiple Models and Consensus Sequence Alignment.

Jahnavi C. Prasad, Michael Silberstein, Carlos J. Camacho, Sandor Vajda

Proceedings of the Algorithms in Bioinformatics, Third International Workshop, 2003