Javier Sancho

According to our database, Javier Sancho authored at least 12 papers between 2004 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Calculation of Protein Folding Thermodynamics Using Molecular Dynamics Simulations.

Juan José Galano-Frutos, Francho Nerín-Fonz, Javier Sancho

J. Chem. Inf. Model., December, 2023

Accurate and efficient constrained molecular dynamics of polymers using Newton's method and special purpose code.

Lorién López-Villellas, Carl Christian Kjelgaard Mikkelsen, Juan José Galano-Frutos, Santiago Marco-Sola, Jesús Alastruey-Benedé, Pablo Ibáñez, Miquel Moretó, Javier Sancho, Pablo García-Risueño

Comput. Phys. Commun., July, 2023

2021

Erratum to: Molecular dynamics simulations for genetic interpretation in protein coding regions: where we are, where to go and when.

Juan José Galano-Frutos, Helena García-Cebollada, Javier Sancho

Briefings Bioinform., 2021

Molecular dynamics simulations for genetic interpretation in protein coding regions: where we are, where to go and when.

Juan José Galano-Frutos, Helena García-Cebollada, Javier Sancho

Briefings Bioinform., 2021

2019

Accurate Calculation of Barnase and SNase Folding Energetics Using Short Molecular Dynamics Simulations and an Atomistic Model of the Unfolded Ensemble: Evaluation of Force Fields and Water Models.

Juan José Galano-Frutos, Javier Sancho

J. Chem. Inf. Model., 2019

2012

Defining the Nature of Thermal Intermediate in 3 State Folding Proteins: Apoflavodoxin, a Study Case.

Rebeca García-Fandiño, Pau Bernadó, Sara Ayuso-Tejedor, Javier Sancho, Modesto Orozco

PLoS Comput. Biol., 2012

2009

VSDMIP: virtual screening data management on an integrated platform.

Rubén Gil-Redondo, Jorge Estrada, Antonio Morreale, Fernando Herranz, Javier Sancho, Angel R. Ortiz

J. Comput. Aided Mol. Des., 2009

ProtSA: a web application for calculating sequence specific protein solvent accessibilities in the unfolded ensemble.

Jorge Estrada, Pau Bernadó, Martin Blackledge, Javier Sancho

BMC Bioinform., 2009

2005

Design of Ligand Binding to an Engineered Protein Cavity Using Virtual Screening and Thermal Up-shift Evaluation.

Claudia Machicado, Jon López-Llano, Santiago Cuesta-López, Marta Bueno, Javier Sancho

J. Comput. Aided Mol. Des., 2005

2004

Virtual Screening of Small Molecules Binding to an Engineered Protein Cavity in Flavodoxin using Freely Available Docking Software.

Jorge Estrada, Marta Bueno, Adrián Velázquez, Nunilo Cremades, Javier Sancho

Proceedings of the 5th Annual Spanish Bioinformatics Conference, Barcelona, Catalonia, 2004

The Long and Short Flavodoxins: Evolutionary Origin and Role of the Differentiating Loop in Apoflavodoxin Structure.

Marta Bueno, Jesus Tejero, Javier Sancho

Proceedings of the 5th Annual Spanish Bioinformatics Conference, Barcelona, Catalonia, 2004

What Works (and What Doesn't) in Estimating the Change in Free Energy due to Point Mutations in the Protein Interior.

Marta Bueno, Carlos J. Camacho, Javier Sancho

Proceedings of the 5th Annual Spanish Bioinformatics Conference, Barcelona, Catalonia, 2004