Dan He

According to our database1, Dan He authored at least 22 papers between 2010 and 2017.

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Bibliography

2017
IPED2: Inheritance Path Based Pedigree Reconstruction Algorithm for Complicated Pedigrees.
IEEE ACM Trans. Comput. Biol. Bioinform., 2017

MUSE: A Multi-locus Sampling-based Epistasis Algorithm for Quantitative Genetic Trait Prediction.
Proceedings of the Biocomputing 2017: Proceedings of the Pacific Symposium, 2017

2016
MINT: Mutual Information Based Transductive Feature Selection for Genetic Trait Prediction.
IEEE ACM Trans. Comput. Biol. Bioinform., 2016

Does encoding matter? A novel view on the quantitative genetic trait prediction problem.
BMC Bioinform., 2016

Novel applications of multitask learning and multiple output regression to multiple genetic trait prediction.
Bioinform., 2016

2015
MINED: An Efficient Mutual Information Based Epistasis Detection Method to Improve Quantitative Genetic Trait Prediction.
Proceedings of the Bioinformatics Research and Applications - 11th International Symposium, 2015

Performance evaluation of different encoding strategies for quantitative genetic trait prediction.
Proceedings of the 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2015

SAME: a sampling-based multi-locus epistasis algorithm for quantitative genetic trait prediction.
Proceedings of the 6th ACM Conference on Bioinformatics, 2015

2014
IPED2X: A robust pedigree reconstruction algorithm for complicated pedigrees.
J. Bioinform. Comput. Biol., 2014

Transductive HSIC Lasso.
Proceedings of the 2014 SIAM International Conference on Data Mining, 2014

2013
IPED: Inheritance Path-based Pedigree Reconstruction Algorithm Using Genotype Data.
J. Comput. Biol., 2013

Hap-seq: An Optimal Algorithm for Haplotype Phasing with Imputation Using Sequencing Data.
J. Comput. Biol., 2013

MINT: Mutual Information based Transductive Feature Selection for Genetic Trait Prediction.
CoRR, 2013

Leveraging reads that span multiple single nucleotide polymorphisms for haplotype inference from sequencing data.
Bioinform., 2013

IPEDX: An exact algorithm for pedigree reconstruction using genotype data.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012
Efficient Algorithms for Human Genetic Variation Detection using High-throughput Sequencing Techniques.
PhD thesis, 2012

2011
Genotyping common and rare variation using overlapping pool sequencing.
BMC Bioinform., 2011

Efficient algorithms for tandem copy number variation reconstruction in repeat-rich regions.
Bioinform., 2011

Using HLA binding prediction algorithms for epitope mapping in HIV vaccine clinical trials.
Proceedings of the ACM International Conference on Bioinformatics, 2011

2010
Detection and reconstruction of tandemly organized de novo copy number variations.
BMC Bioinform., 2010

Optimal algorithms for haplotype assembly from whole-genome sequence data.
Bioinform., 2010

Effective Algorithms for Fusion Gene Detection.
Proceedings of the Algorithms in Bioinformatics, 10th International Workshop, 2010


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