Daniel-Adriano Silva

According to our database, Daniel-Adriano Silva authored at least 7 papers between 2011 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

De novo design of potent and selective mimics of IL-2 and IL-15.

Daniel-Adriano Silva, Shawn Yu, Umut Y. Ulge, Jamie B. Spangler, Kevin M. Jude, Carlos Labão-Almeida, Lestat R. Ali, Alfredo Quijano-Rubio, Mikel Ruterbusch, Isabel Leung, Tamara Biary, Stephanie J. Crowley, Enrique Marcos, Carl D. Walkey, Brian D. Weitzner, Fátima Pardo Avila, Javier Castellanos, Lauren P. Carter, Lance J. Stewart, Stanley R. Riddell, Marion Pepper, Gonçalo J. L. Bernardes, Michael Dougan, K. Christopher Garcia, David Baker

Nat., 2019

De novo protein design by citizen scientists.

Brian Koepnick, Jeff Flatten, Tamir Husain, Alex Ford, Daniel-Adriano Silva, Matthew J. Bick, Aaron Bauer, Gaohua Liu, Yojiro Ishida, Alexander Boykov, Roger D. Estep, Susan Kleinfelter, Toke Nørgård-Solano, Linda Wei, Foldit players, Gaetano T. Montelione, Frank DiMaio, Zoran Popovic, Firas Khatib, Seth Cooper, David Baker

Nat., 2019

2017

Massively parallel <i>de novo</i> protein design for targeted therapeutics.

Aaron Chevalier, Daniel-Adriano Silva, Gabriel J. Rocklin, Derrick R. Hicks, Renan Vergara, Patience Murapa, Steffen M. Bernard, Lu Zhang, Kwok-Ho Lam, Guorui Yao, Christopher D. Bahl, Shin-Ichiro Miyashita, Inna Goreshnik, James T. Fuller, Merika T. Koday, Cody M. Jenkins, Tom Colvin, Lauren P. Carter, Alan Bohn, Cassie M. Bryan, D. Alejandro Fernández-Velasco, Lance J. Stewart, Min Dong, Xuhui Huang, Rongsheng Jin, Ian A. Wilson, Deborah H. Fuller, David Baker

Nat., 2017

2015

Structural Model of RNA Polymerase II Elongation Complex with Complete Transcription Bubble Reveals NTP Entry Routes.

Lu Zhang, Daniel-Adriano Silva, Fátima Pardo Avila, Dong Wang, Xuhui Huang

PLoS Comput. Biol., 2015

2014

Quantitatively Characterizing the Ligand Binding Mechanisms of Choline Binding Protein Using Markov State Model Analysis.

Shuo Gu, Daniel-Adriano Silva, Luming Meng, Alexander Yue, Xuhui Huang

PLoS Comput. Biol., 2014

2012

Force field development for cofactors in the photosystem II.

Lu Zhang, Daniel-Adriano Silva, YiJing Yan, Xuhui Huang

J. Comput. Chem., 2012

2011

A Role for Both Conformational Selection and Induced Fit in Ligand Binding by the LAO Protein.

Daniel-Adriano Silva, Gregory R. Bowman, Alejandro Sosa-Peinado, Xuhui Huang

PLoS Comput. Biol., 2011