David A. Duchêne

According to our database, David A. Duchêne authored at least 8 papers between 2018 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2026

BayesAgent: Bayesian Agentic Reasoning Under Uncertainty via Verbalized Probabilistic Graphical Modeling.

Hengguan Huang, Xing Shen, Guang-Yuan Hao, Songtao Wang, Lingfa Meng, Dianbo Liu, David A. Duchêne, Hao Wang, Samir Bhatt

Proceedings of the Fortieth AAAI Conference on Artificial Intelligence, 2026

2025

phylo2vec: a library for vector-based phylogenetic tree manipulation.

Neil Scheidwasser, Ayush Nag, Matthew J. Penn, Anthony MV Jakob, Frederik Mølkjær Andersen, Mark P. Khurana, Landung Setiawan, David A. Duchêne, Samir Bhatt

J. Open Source Softw., December, 2025

phylo2vec: a library for vector-based phylogenetic tree manipulation.

Neil Scheidwasser, Ayush Nag, Matthew J. Penn, Anthony MV Jakob, Frederik Mølkjær Andersen, Mark P. Khurana, Landung Setiawan, Madeline Gordon, David A. Duchêne, Samir Bhatt

CoRR, June, 2025

Artificial intelligence for modelling infectious disease epidemics.

Moritz U. G. Kraemer, Joseph L.-H. Tsui, Serina Chang, Spyros Lytras, Mark P. Khurana, Samantha Vanderslott, Sumali Bajaj, Neil Scheidwasser, Jacob Liam Curran-Sebastian, Elizaveta Semenova, Mengyan Zhang, H. Juliette T. Unwin, Oliver J. Watson, Cathal Mills, Abhishek Dasgupta, Luca Ferretti, Samuel V. Scarpino, Etien Koua, Oliver Morgan, Houriiyah Tegally, Ulrich Paquet, Loukas Moutsianas, Christophe Fraser, Neil M. Ferguson, Eric J. Topol, David A. Duchêne, Tanja Stadler, Patricia Kingori, Michael J. Parker, Francesca Dominici, Nigel Shadbolt, Marc A. Suchard, Oliver Ratmann, Seth R. Flaxman, Edward C. Holmes, Manuel Gomez-Rodriguez, Bernhard Schölkopf, Christl A. Donnelly, Oliver G. Pybus, Simon Cauchemez, Samir Bhatt

Nat., February, 2025

2024

Contrastive Deep Learning Reveals Age Biomarkers in Histopathological Skin Biopsies.

Kaustubh Chakradeo, Pernille Nielsen, Lise Mette Rahbek Gjerdrum, Gry Sahl Hansen, David A. Duchêne, Laust Hvas Mortensen, Majken K. Jensen, Samir Bhatt

CoRR, 2024

2023

Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees.

Matthew J. Penn, Neil Scheidwasser, Joseph Penn, Christl A. Donnelly, David A. Duchêne, Samir Bhatt

CoRR, 2023

Phylo2Vec: a vector representation for binary trees.

Matthew J. Penn, Neil Scheidwasser, Mark P. Khurana, David A. Duchêne, Christl A. Donnelly, Samir Bhatt

CoRR, 2023

2018

PhyloMAd: efficient assessment of phylogenomic model adequacy.

David A. Duchêne, Sebastián Duchêne, Simon Y. W. Ho

Bioinform., 2018