David Gfeller

According to our database, David Gfeller authored at least 11 papers between 2012 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2023

The MHC Motif Atlas: a database of MHC binding specificities and ligands.

Daniel M. Tadros, Simon Eggenschwiler, Julien Racle, David Gfeller

Nucleic Acids Res., January, 2023

2022

Metacells untangle large and complex single-cell transcriptome networks.

Mariia Bilous, Loc Tran, Chiara Cianciaruso, Aurélie Gabriel, Hugo Michel, Santiago J. Carmona, Mikael J. Pittet, David Gfeller

BMC Bioinform., December, 2022

2019

Computational KIR copy number discovery reveals interaction between inhibitory receptor burden and survival.

Rachel M. Pyke, Raphael Genolet, Alexandre Harari, George Coukos, David Gfeller, Hannah Carter

Proceedings of the Biocomputing 2019: Proceedings of the Pacific Symposium, 2019

2018

Polymorphic sites preferentially avoid co-evolving residues in MHC class I proteins.

Linda Dib, Nicolas Salamin, David Gfeller

PLoS Comput. Biol., 2018

2017

Deciphering HLA-I motifs across HLA peptidomes improves neo-antigen predictions and identifies allostery regulating HLA specificity.

Michal Bassani-Sternberg, Chloé Chong, Philippe Guillaume, Marthe Solleder, HuiSong Pak, Philippe O. Gannon, Lana E. Kandalaft, George Coukos, David Gfeller

PLoS Comput. Biol., 2017

2015

Protein homology reveals new targets for bioactive small molecules.

David Gfeller, Vincent Zoete

Bioinform., 2015

2014

SwissTargetPrediction: a web server for target prediction of bioactive small molecules.

David Gfeller, Aurélien Grosdidier, Matthias Wirth, Antoine Daina, Olivier Michielin, Vincent Zoete

Nucleic Acids Res., 2014

2013

SwissSidechain: a molecular and structural database of non-natural sidechains.

David Gfeller, Olivier Michielin, Vincent Zoete

Nucleic Acids Res., 2013

Shaping the interaction landscape of bioactive molecules.

David Gfeller, Olivier Michielin, Vincent Zoete

Bioinform., 2013

2012

Beyond the Binding Site: The Role of the β2 - β3 Loop and Extra-Domain Structures in PDZ Domains.

Stefano Mostarda, David Gfeller, Francesco Rao

PLoS Comput. Biol., 2012

Expanding molecular modeling and design tools to non-natural sidechains.

David Gfeller, Olivier Michielin, Vincent Zoete

J. Comput. Chem., 2012