Feifei Cui

According to our database, Feifei Cui authored at least 31 papers between 2021 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2025

RMDNet: RNA-aware dung beetle optimization-based multi-branch integration network for RNA-protein binding sites prediction.

Jiangbo Zhang, Yunhui Peng, Feifei Cui, Zilong Zhang, Shankai Yan, Qingchen Zhang

BMC Bioinform., December, 2025

FERA-Net: A Novel Algorithm for Mars Water-Ice Cloud Segmentation Integrating Feature Enhancement, Residual, and Attention Mechanisms.

Xu Ma, Jialong Lai, Zhicheng Zhong, Feifei Cui

IEEE J. Sel. Top. Appl. Earth Obs. Remote. Sens., 2025

Taco-DDI: accurate prediction of drug-drug interaction events using graph transformer-based architecture and dynamic co-attention matrices.

Jianbo Qiao, Xu Guo, Junru Jin, Ding Wang, Kefei Li, Wenjia Gao, Feifei Cui, Zilong Zhang, Hua Shi, Leyi Wei

Neural Networks, 2025

UMPPI: Unveiling Multilevel Protein-Peptide Interaction Prediction via Language Models.

Shuwen Xiong, Jiajie Cai, Hua Shi, Feifei Cui, Zilong Zhang, Leyi Wei

J. Chem. Inf. Model., 2025

Deep Learning in Antimicrobial Peptide Prediction.

Changhang Lin, Shuwen Xiong, Feifei Cui, Zilong Zhang, Hua Shi, Leyi Wei

J. Chem. Inf. Model., 2025

NeuroPred-AIMP: Multimodal Deep Learning for Neuropeptide Prediction via Protein Language Modeling and Temporal Convolutional Networks.

Jinjin Li, Shuwen Xiong, Hua Shi, Feifei Cui, Zilong Zhang, Leyi Wei

J. Chem. Inf. Model., 2025

GICL: A Cross-Modal Drug Property Prediction Framework Based on Knowledge Enhancement of Large Language Models.

Na Li, Jianbo Qiao, Fei Gao, Yanling Wang, Hua Shi, Zilong Zhang, Feifei Cui, Lichao Zhang, Leyi Wei

J. Chem. Inf. Model., 2025

m5U-HybridNet: Integrating an RNA Foundation Model with CNN Features for Accurate Prediction of 5-Methyluridine Modification Sites.

Xinyu Li, Zhenjie Luo, Jingwei Lv, Chao Yang, Shankai Yan, Junlin Xu, Yajie Meng, Leyi Wei, Zilong Zhang, Quan Zou, Feifei Cui

J. Chem. Inf. Model., 2025

AVP-HNCL: Innovative Contrastive Learning with a Queue-Based Negative Sampling Strategy for Dual-Phase Antiviral Peptide Prediction.

Yuanhao Li, Aoyun Geng, Zheyu Zhou, Feifei Cui, Junlin Xu, Yajie Meng, Leyi Wei, Quan Zou, Qingchen Zhang, Zilong Zhang

J. Chem. Inf. Model., 2025

ACP-CLB: An Anticancer Peptide Prediction Model Based on Multichannel Discriminative Processing and Integration of Large Pretrained Protein Language Models.

Aoyun Geng, Zhenjie Luo, Aohan Li, Zilong Zhang, Quan Zou, Leyi Wei, Feifei Cui

J. Chem. Inf. Model., 2025

Adaptive debiasing learning for drug repositioning.

Yajie Meng, Yi Wang, Xinrong Hu, Changcheng Lu, Xianfang Tang, Feifei Cui, Pan Zeng, Yuhua Yao, Jialiang Yang, Junlin Xu

J. Biomed. Informatics, 2025

PLM-IL4: Enhancing IL-4-inducing peptide prediction with protein language model.

Ruiqi Liu, Shankai Yan, Zilong Zhang, Junlin Xu, Yajie Meng, Qingchen Zhang, Leyi Wei, Quan Zou, Feifei Cui

Comput. Biol. Chem., 2025

2024

Machine learning-based prediction model for distant metastasis of breast cancer.

Hao Duan, Yu Zhang, Haoye Qiu, Xiuhao Fu, Chunling Liu, Xiaofeng Zang, Anqi Xu, Ziyue Wu, Xingfeng Li, Qingchen Zhang, Zilong Zhang, Feifei Cui

Comput. Biol. Medicine, February, 2024

Toward Data Integrity Attacks Against Distributed Dynamic State Estimation in Smart Grid.

Dou An, Feiye Zhang, Feifei Cui, Qingyu Yang

IEEE Trans Autom. Sci. Eng., January, 2024

Hyb_SEnc: An Antituberculosis Peptide Predictor Based on a Hybrid Feature Vector and Stacked Ensemble Learning.

Xiuhao Fu, Hao Duan, Xiaofeng Zang, Chunling Liu, Xingfeng Li, Qingchen Zhang, Zilong Zhang, Quan Zou, Feifei Cui

IEEE ACM Trans. Comput. Biol. Bioinform., 2024

MVST: Identifying spatial domains of spatial transcriptomes from multiple views using multi-view graph convolutional networks.

Hao Duan, Qingchen Zhang, Feifei Cui, Quan Zou, Zilong Zhang

PLoS Comput. Biol., 2024

PSAC-6mA: 6mA site identifier using self-attention capsule network based on sequence-positioning.

Zheyu Zhou, Cuilin Xiao, Jinfen Yin, Jiayi She, Hao Duan, Chunling Liu, Xiuhao Fu, Feifei Cui, Qi Qi, Zilong Zhang

Comput. Biol. Medicine, 2024

MultiFeatVotPIP: a voting-based ensemble learning framework for predicting proinflammatory peptides.

Chaorui Yan, Aoyun Geng, Zhuoyu Pan, Zilong Zhang, Feifei Cui

Briefings Bioinform., 2024

BMPCD: A Pan-Cancer Detection Method Base on Learning Cross-Domain Feature.

Dongmei He, Xin Yang, Zilong Zhang, Feifei Cui, Shankai Yan

Proceedings of the 2024 8th International Conference on Computational Biology and Bioinformatics, 2024

RNASite: A one-stop tool website that integrates multiple RNA modification site databases and servers.

Jiahao Yuan, Xingfeng Li, Zilong Zhang, Qingchen Zhang, Quan Zou, Feifei Cui

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

BEES: A New Acoustic Task for Blended Emotion Estimation in Speech.

Xingfeng Li, Xiaohan Shi, Yuke Si, Zilong Zhang, Feifei Cui, Yongwei Li, Yang Liu, Masashi Unoki, Masato Akagi

Proceedings of the Asia Pacific Signal and Information Processing Association Annual Summit and Conference, 2024

2023

Human-Spa: An Online Platform Based on Spatial Transcriptome Data for Diseases of Human Systems.

Yunyun Su, Feifei Cui, Shiyu Yan, Quan Zou, Chen Cao, Zilong Zhang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

AIPPT: Predicts anti-inflammatory peptides using the most characteristic subset of bases and sequences by stacking ensemble learning strategies.

Ruiqi Liu, Zilong Zhang, Xiuhao Fu, Shankai Yan, Feifei Cui

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022

webTWAS: a resource for disease candidate susceptibility genes identified by transcriptome-wide association study.

Chen Cao, Jianhua Wang, Devin Kwok, Feifei Cui, Zilong Zhang, Da Zhao, Mulin Jun Li, Quan Zou

Nucleic Acids Res., 2022

Single-cell RNA analysis reveals the potential risk of organ-specific cell types vulnerable to SARS-CoV-2 infections.

Zilong Zhang, Feifei Cui, Chen Cao, Qingsuo Wang, Quan Zou

Comput. Biol. Medicine, 2022

webSCST: an interactive web application for single-cell RNA-sequencing data and spatial transcriptomic data integration.

Zilong Zhang, Feifei Cui, Wei Su, Lijun Dou, Anqi Xu, Chen Cao, Quan Zou

Bioinform., 2022

2021

Dielectric Properties of Lunar Materials at the Chang'e-4 Landing Site.

Jialong Lai, Feifei Cui, Yi Xu, Chaofei Liu, Ling Zhang

Remote. Sens., 2021

Computational biology and chemistry Special section editorial: Computational analyses for miRNA.

Feifei Cui, Murong Zhou, Quan Zou

Comput. Biol. Chem., 2021

Critical downstream analysis steps for single-cell RNA sequencing data.

Zilong Zhang, Feifei Cui, Chen Lin, Lingling Zhao, Chunyu Wang, Quan Zou

Briefings Bioinform., 2021

Anticancer peptides prediction with deep representation learning features.

Zhibin Lv, Feifei Cui, Quan Zou, Lichao Zhang, Lei Xu

Briefings Bioinform., 2021

IEEE Access Special Section Editorial: Feature Representation and Learning Methods With Applications in Large-Scale Biological Sequence Analysis.

Feifei Cui, Quan Zou, Qin Ma, Leyi Wei, Jijun Tang, Dariusz Mrozek

IEEE Access, 2021