Frédéric Mahé

According to our database, Frédéric Mahé authored at least 4 papers between 2006 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

NanoASV: a snakemake workflow for reproducible field-based Nanopore full-length 16S metabarcoding amplicon data analysis.

Arthur Cousson, Frédéric Mahé, Ulysse Guyet, Damase Razafimahafaly, Laetitia Bernard

Bioinform., 2025

2021

Swarm v3: towards tera-scale amplicon clustering.

Frédéric Mahé, Lucas Czech, Alexandros Stamatakis, Christopher Quince, Colomban de Vargas, Micah Dunthorn, Torbjørn Rognes

Bioinform., 2021

2013

The Protist Ribosomal Reference database (PR²): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy.

Laure Guillou, Dipankar Bachar, Stéphane Audic, David Bass, Cédric Berney, Lucie Bittner, Christophe Boutte, Gaétan Burgaud, Colomban de Vargas, Johan Decelle, Javier del Campo, John R. Dolan, Micah Dunthorn, Bente Edvardsen, Maria Holzmann, Wiebe H. C. F. Kooistra, Enrique Lara, Noan Le Bescot, Ramiro Logares, Frédéric Mahé, Ramon Massana, Marina Montresor, Raphael Morard, Fabrice Not, Jan Pawlowski, Ian Probert, Anne-Laure Sauvadet, Raffaele Siano, Thorsten Stoeck, Daniel Vaulot, Pascal Zimmermann, Richard Christen

Nucleic Acids Res., 2013

2006

Browsing repeats in genomes: Pygram and an application to non-coding region analysis.

Patrick Durand, Frédéric Mahé, Anne-Sophie Valin, Jacques Nicolas

BMC Bioinform., 2006