Torbjørn Rognes

According to our database, Torbjørn Rognes authored at least 9 papers between 1998 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

HoCoRT: host contamination removal tool.

Ignas Rumbavicius, Trine Rounge, Torbjørn Rognes

BMC Bioinform., December, 2023

2022

CompAIRR: ultra-fast comparison of adaptive immune receptor repertoires by exact and approximate sequence matching.

Torbjørn Rognes, Lonneke Scheffer, Victor Greiff, Geir Kjetil Sandve

Bioinform., 2022

2021

Swarm v3: towards tera-scale amplicon clustering.

Frédéric Mahé, Lucas Czech, Alexandros Stamatakis, Christopher Quince, Colomban de Vargas, Micah Dunthorn, Torbjørn Rognes

Bioinform., 2021

2020

NucBreak: location of structural errors in a genome assembly by using paired-end Illumina reads.

Ksenia Khelik, Geir Kjetil Sandve, Alexander Johan Nederbragt, Torbjørn Rognes

BMC Bioinform., 2020

2017

NucDiff: in-depth characterization and annotation of differences between two sets of DNA sequences.

Ksenia Khelik, Karin Lagesen, Geir Kjetil Sandve, Torbjørn Rognes, Alexander Johan Nederbragt

BMC Bioinform., 2017

2011

Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation.

Torbjørn Rognes

BMC Bioinform., 2011

2005

PARALIGN: rapid and sensitive sequence similarity searches powered by parallel computing technology.

Per Eystein Sæbø, Sten Morten Andersen, Jon Myrseth, Jon K. Laerdahl, Torbjørn Rognes

Nucleic Acids Res., 2005

2000

Six-fold speed-up of Smith-Waterman sequence database searches using parallel processing on common microprocessors.

Torbjørn Rognes, Erling Seeberg

Bioinform., 2000

1998

SALSA: improved protein database searching by a new algorithm for assembly of sequence fragments into gapped alignments.

Torbjørn Rognes, Erling Seeberg

Bioinform., 1998