Gerard Cagney

According to our database, Gerard Cagney authored at least 11 papers between 2005 and 2012.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2012

Global landscape of HIV-human protein complexes.

Stefanie Jäger, Peter Cimermancic, Natali Gulbahce, Jeffrey R. Johnson, Kathryn E. McGovern, Starlynn C. Clarke, Michael Shales, Gaelle Mercenne, Lars Pache, Kathy Li, Hilda Hernandez, Gwendolyn M. Jang, Shoshannah L. Roth, Eyal Akiva, John Marlett, Melanie Stephens, Iván D'Orso, Jason Fernandes, Marie E. Fahey, Cathal Mahon, Anthony J. O'Donoghue, Aleksandar Todorovic, John H. Morris, David A. Maltby, Tom Alber, Gerard Cagney, Frederic D. Bushman, John A. Young, Sumit K. Chanda, Wesley I. Sundquist, Tanja Kortemme, Ryan D. Hernandez, Charles S. Craik, Alma Burlingame, Andrej Sali, Alan D. Frankel, Nevan J. Krogan

Nat., 2012

2011

Improved functional overview of protein complexes using inferred epistatic relationships.

Colm Ryan, Derek Greene, Aude Guénolé, Haico van Attikum, Nevan J. Krogan, Pádraig Cunningham, Gerard Cagney

BMC Syst. Biol., 2011

Distinct configurations of protein complexes and biochemical pathways revealed by epistatic interaction network motifs.

Fergal P. Casey, Nevan J. Krogan, Denis C. Shields, Gerard Cagney

BMC Syst. Biol., 2011

2010

Missing value imputation for epistatic MAPs.

Colm Ryan, Derek Greene, Gerard Cagney, Padraig Cunningham

BMC Bioinform., 2010

An Overview of Label-Free Quantitation Methods in Proteomics by Mass Spectrometry.

Jason W. H. Wong, Gerard Cagney

Proceedings of the Proteome Bioinformatics, 2010

2008

Ensemble non-negative matrix factorization methods for clustering protein-protein interactions.

Derek Greene, Gerard Cagney, Nevan J. Krogan, Padraig Cunningham

Bioinform., 2008

Optimal stepwise experimental design for pairwise functional interaction studies.

Fergal P. Casey, Gerard Cagney, Nevan J. Krogan, Denis C. Shields

Bioinform., 2008

Computational methods for the comparative quantification of proteins in label-free LCⁿ-MS experiments.

Jason W. H. Wong, Matthew J. Sullivan, Gerard Cagney

Briefings Bioinform., 2008

Experimental Methods for Protein Interaction Identification and Characterization.

Peter Uetz, Björn Titz, Gerard Cagney

Proceedings of the Protein-protein Interactions and Networks: Identification, 2008

2007

msmsEval: tandem mass spectral quality assignment for high-throughput proteomics.

Jason W. H. Wong, Matthew J. Sullivan, Hugh M. Cartwright, Gerard Cagney

BMC Bioinform., 2007

2005

SpecAlign - processing and alignment of mass spectra datasets.

Jason W. H. Wong, Gerard Cagney, Hugh M. Cartwright

Bioinform., 2005