Frederic D. Bushman

According to our database, Frederic D. Bushman authored at least 9 papers between 2006 and 2020.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2020

grabseqs: simple downloading of reads and metadata from multiple next-generation sequencing data repositories.

Louis J. Taylor, Arwa Abbas, Frederic D. Bushman

Bioinform., 2020

2017

swga: a primer design toolkit for selective whole genome amplification.

Erik L. Clarke, Sesh A. Sundararaman, Stephanie N. Seifert, Frederic D. Bushman, Beatrice H. Hahn, Dustin Brisson

Bioinform., 2017

2015

Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA.

Brendan J. Kelly, Robert Gross, Kyle Bittinger, Scott A. Sherrill-Mix, James D. Lewis, Ronald G. Collman, Frederic D. Bushman, Hongzhe Li

Bioinform., 2015

2014

Comparing DNA integration site clusters with scan statistics.

Charles C. Berry, Karen E. Ocwieja, Nirav Malani, Frederic D. Bushman

Bioinform., 2014

2012

Global landscape of HIV-human protein complexes.

Stefanie Jäger, Peter Cimermancic, Natali Gulbahce, Jeffrey R. Johnson, Kathryn E. McGovern, Starlynn C. Clarke, Michael Shales, Gaelle Mercenne, Lars Pache, Kathy Li, Hilda Hernandez, Gwendolyn M. Jang, Shoshannah L. Roth, Eyal Akiva, John Marlett, Melanie Stephens, Iván D'Orso, Jason Fernandes, Marie E. Fahey, Cathal Mahon, Anthony J. O'Donoghue, Aleksandar Todorovic, John H. Morris, David A. Maltby, Tom Alber, Gerard Cagney, Frederic D. Bushman, John A. Young, Sumit K. Chanda, Wesley I. Sundquist, Tanja Kortemme, Ryan D. Hernandez, Charles S. Craik, Alma Burlingame, Andrej Sali, Alan D. Frankel, Nevan J. Krogan

Nat., 2012

Associating microbiome composition with environmental covariates using generalized UniFrac distances.

Jun Chen, Kyle Bittinger, Emily S. Charlson, Christian Hoffmann, James D. Lewis, Gary D. Wu, Ronald G. Collman, Frederic D. Bushman, Hongzhe Li

Bioinform., 2012

Estimating abundances of retroviral insertion sites from DNA fragment length data.

Charles C. Berry, Nicolas A. Gillet, Anat Melamed, Niall A. Gormley, Charles R. M. Bangham, Frederic D. Bushman

Bioinform., 2012

2010

PyNAST: a flexible tool for aligning sequences to a template alignment.

J. Gregory Caporaso, Kyle Bittinger, Frederic D. Bushman, Todd Z. DeSantis, Gary L. Andersen, Rob Knight

Bioinform., 2010

2006

Selection of Target Sites for Mobile DNA Integration in the Human Genome.

Charles C. Berry, Sridhar Hannenhalli, Jeremy Leipzig, Frederic D. Bushman

PLoS Comput. Biol., 2006