Gergely Csaba

According to our database, Gergely Csaba authored at least 14 papers between 2007 and 2021.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2021

Toward a gold standard for benchmarking gene set enrichment analysis.

Ludwig Geistlinger, Gergely Csaba, Mara Santarelli, Marcel Ramos, Lucas Schiffer, Nitesh Turaga, Charity W. Law, Sean R. Davis, Vincent J. Carey, Martin Morgan, Ralf Zimmer, Levi Waldron

Briefings Bioinform., 2021

2019

Comparison of six breast cancer classifiers using qPCR.

Evi Berchtold, Martina Vetter, Melanie Gündert, Gergely Csaba, Christine Fathke, Susanne E. Ulbrich, Christoph Thomssen, Ralf Zimmer, Eva J. Kantelhardt

Bioinform., 2019

YESdb: integrative analysis of environmental stress in yeast.

Evi Berchtold, Gergely Csaba, Ralf Zimmer

Database J. Biol. Databases Curation, 2019

2017

RelExplain - integrating data and networks to explain biological processes.

Evi Berchtold, Gergely Csaba, Ralf Zimmer

Bioinform., 2017

2016

Bioconductor's EnrichmentBrowser: seamless navigation through combined results of set- & network-based enrichment analysis.

Ludwig Geistlinger, Gergely Csaba, Ralf Zimmer

BMC Bioinform., 2016

2015

ContextMap 2: fast and accurate context-based RNA-seq mapping.

Thomas Bonfert, Evelyn Kirner, Gergely Csaba, Ralf Zimmer, Caroline C. Friedel

BMC Bioinform., 2015

2013

Context based bioinformatics.

Gergely Csaba

PhD thesis, 2013

2012

A context-based approach to identify the most likely mapping for RNA-seq experiments.

Thomas Bonfert, Gergely Csaba, Ralf Zimmer, Caroline C. Friedel

BMC Bioinform., 2012

2011

From sets to graphs: towards a realistic enrichment analysis of transcriptomic systems.

Ludwig Geistlinger, Gergely Csaba, Robert Küffner, Nicola J. Mulder, Ralf Zimmer

Bioinform., 2011

2010

miRSel: Automated extraction of associations between microRNAs and genes from the biomedical literature.

Haroon Naeem, Robert Küffner, Gergely Csaba, Ralf Zimmer

BMC Bioinform., 2010

Vorescore - fold recognition improved by rescoring of protein structure models.

Gergely Csaba, Ralf Zimmer

Bioinform., 2010

2009

Algorithmische Systembiologie mit Petrinetzen - Von qualitativen zu quantitativen Systemmodellen.

Fabian Birzele, Gergely Csaba, Florian Erhard, Caroline C. Friedel, Robert Küffner, Tobias Petri, Lukas Windhager, Ralf Zimmer

Inform. Spektrum, 2009

2008

Protein structure alignment considering phenotypic plasticity.

Gergely Csaba, Fabian Birzele, Ralf Zimmer

Proceedings of the ECCB'08 Proceedings, 2008

2007

Vorolign - fast structural alignment using Voronoi contacts.

Fabian Birzele, Jan E. Gewehr, Gergely Csaba, Ralf Zimmer

Bioinform., 2007