Heejoon Chae

Orcid: 0000-0002-0960-5829

According to our database1, Heejoon Chae authored at least 22 papers between 2010 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
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Links

On csauthors.net:

Bibliography

2023
meth-SemiCancer: a cancer subtype classification framework via semi-supervised learning utilizing DNA methylation profiles.
BMC Bioinform., December, 2023

moBRCA-net: a breast cancer subtype classification framework based on multi-omics attention neural networks.
BMC Bioinform., December, 2023

2021
BioVLAB-Cancer-Pharmacogenomics: tumor heterogeneity and pharmacogenomics analysis of multi-omics data from tumor on the cloud.
Bioinform., 2021

Erratum to: Machine learning-based analysis of multi-omics data on the cloud for investigating gene regulations.
Briefings Bioinform., 2021

Machine learning-based analysis of multi-omics data on the cloud for investigating gene regulations.
Briefings Bioinform., 2021

Correction to "A Non-Negative Matrix Factorization Based Framework for the Analysis of Multi-Class Time-Series Single-Cell RNA-Seq Data".
IEEE Access, 2021

Cell Subtype Classification via Representation Learning Based on a Denoising Autoencoder for Single-Cell RNA Sequencing.
IEEE Access, 2021

IDEA: Integrating Divisive and Ensemble-Agglomerate hierarchical clustering framework for arbitrary shape data.
Proceedings of the 2021 IEEE International Conference on Big Data (Big Data), 2021

2020
methCancer-gen: a DNA methylome dataset generator for user-specified cancer type based on conditional variational autoencoder.
BMC Bioinform., 2020

A Non-Negative Matrix Factorization-Based Framework for the Analysis of Multi-Class Time-Series Single-Cell RNA-Seq Data.
IEEE Access, 2020

2019
HTRgene: a computational method to perform the integrated analysis of multiple heterogeneous time-series data: case analysis of cold and heat stress response signaling genes in Arabidopsis.
BMC Bioinform., 2019

2018
Cloud-BS: A MapReduce-based bisulfite sequencing aligner on cloud.
J. Bioinform. Comput. Biol., 2018

BiSpark: a Spark-based highly scalable aligner for bisulfite sequencing data.
BMC Bioinform., 2018

HTRgene: Integrating Multiple Heterogeneous Time-series Data to Investigate Cold and Heat Stress Response Signaling Genes in Arabidopsis.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017
Integration of heterogeneous time series gene expression data by clustering on time dimension.
Proceedings of the 2017 IEEE International Conference on Big Data and Smart Computing, 2017

2016
Subtype-specific CpG island shore methylation and mutation patterns in 30 breast cancer cell lines.
BMC Syst. Biol., 2016

2015
BioVLAB-MMIA-NGS: microRNA-mRNA integrated analysis using high-throughput sequencing data.
Bioinform., 2015

2013
Genome-Wide Analysis and Modeling of DNA methylation susceptibility in 30 Breast Cancer Cell Lines by using CPG Flanking Sequences.
J. Bioinform. Comput. Biol., 2013

Bio and health informatics meets cloud : BioVLab as an example.
Health Inf. Sci. Syst., 2013

2011
Transitioning BioVLab cloud workbench to a science gateway.
Proceedings of the 2011 TeraGrid Conference - Extreme Digital Discovery, 2011

BioVLAB-MMIA: A Reconfigurable Cloud Computing Environment for microRNA and mRNA Integrated Analysis.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011

2010
EGGSlicer: predicting biologically meaningful gene sets from gene clusters using gene ontology information.
Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010


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