Hesham H. Ali

According to our database1, Hesham H. Ali authored at least 150 papers between 1992 and 2017.

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Bibliography

2017
An Evolutionary Graph-Based Approach for Managing Self-Organized IoT Networks.
Proceedings of the 15th ACM International Symposium on Mobility Management and Wireless Access, 2017

Parallel NGS Assembly Using Distributed Assembly Graphs Enriched with Biological Knowledge.
Proceedings of the 2017 IEEE International Parallel and Distributed Processing Symposium Workshops, 2017

Graph-based Analysis of Genetic Features Associated with Mobile Elements in Crohn s Disease and Healthy Gut Microbiomes.
Proceedings of the 10th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2017), 2017

Granularity-aware fusion of biological networks for information extraction.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Evaluation of the oral microbiome as a biomarker for early detection of human oral carcinomas.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Analysis of clustering algorithms in biological networks.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Using gait parameters to recognize various stages of Parkinson's disease.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

A systems biology approach for modeling microbiomes using split graphs.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

On the integration of assembly and non-assembly approaches for comparing biological sequences.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

A Correlation Network Model Utilizing Gait Parameters for Evaluating Health Levels.
Proceedings of the 8th ACM International Conference on Bioinformatics, 2017

A Hierarchical Learning Model for Extracting Public Health Data from Social Media.
Proceedings of the 23rd Americas Conference on Information Systems, 2017

2016
A dynamic run-profile energy-aware approach for scheduling computationally intensive bioinformatics applications.
Proceedings of the International Conference on High Performance Computing & Simulation, 2016

Tutorials: Tutorial I: HPC and big data analytics in biomedical informatics.
Proceedings of the International Conference on High Performance Computing & Simulation, 2016

On the Impact of Granularity in Extracting Knowledge from Bioinformatics Data.
Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2016), 2016

2015
A Multi-stage Graph Approach for Efficient Clustering in Self-Organized Wireless Sensor Networks.
Proceedings of the SENSORNETS 2015, 2015

Applications of High Performance Computing in Bioinformatics, Computational Biology and Computational Chemistry.
Proceedings of the Bioinformatics and Biomedical Engineering, 2015

Identification of Biologically Significant Elements Using Correlation Networks in High Performance Computing Environments.
Proceedings of the Bioinformatics and Biomedical Engineering, 2015

Identifying Aging Genes in the Aging Mouse Hypothalamus Using Gateway Node Analysis of Correlation Networks.
Proceedings of the BIOINFORMATICS 2015, 2015

Next generation sequence assembler mis-assembly of phage genomes with terminal redundancy.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

On the comparison of state- and transition-based analysis of biological relevance in gene co-expression networks.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014
Special Issue on ICCS 2012.
J. Comput. Science, 2014

Optimisation of miRNA-mRNA relationship prediction using biological features.
I. J. Computational Biology and Drug Design, 2014

Identifying aging-related genes in mouse hippocampus using gateway nodes.
BMC Systems Biology, 2014

An integrated model of human Biomedical and Clinical Data structures.
Proceedings of the IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, 2014

Introduction to Data Analysis and Visualization in Biomedical Informatics Minitrack.
Proceedings of the 47th Hawaii International Conference on System Sciences, 2014

On the Robustness of the Biological Correlation Network Model.
Proceedings of the BIOINFORMATICS 2014, 2014

On the impact of data integration and edge enrichment in mining significant signals from biological networks.
Proceedings of the 5th ACM Conference on Bioinformatics, 2014

Focus: a new multilayer graph model for short read analysis and extraction of biologically relevant features.
Proceedings of the 5th ACM Conference on Bioinformatics, 2014

2013
An efficient and scalable graph modeling approach for capturing information at different levels in next generation sequencing reads.
BMC Bioinformatics, 2013

A base composition analysis of natural patterns for the preprocessing of metagenome sequences.
BMC Bioinformatics, 2013

Exploring Database Keyword Search for Association Studies between Genetic Variants and Diseases.
Proceedings of the First International Conference on Information Technology and Quantitative Management, 2013

A structure-preserving hybrid-chordal filter for sampling in correlation networks.
Proceedings of the International Conference on High Performance Computing & Simulation, 2013

Analysis of Incrementally Generated Clusters in Biological Networks Using Graph-Theoretic Filters and Ontology Enrichment.
Proceedings of the 13th IEEE International Conference on Data Mining Workshops, 2013

A Tolerance Graph Approach for Domain-Specific Assembly of Next Generation Sequencing Data.
Proceedings of the 13th IEEE International Conference on Data Mining Workshops, 2013

On Identifying and Analyzing Significant Nodes in Protein-Protein Interaction Networks.
Proceedings of the 13th IEEE International Conference on Data Mining Workshops, 2013

On Mining Biological Signals Using Correlation Networks.
Proceedings of the 13th IEEE International Conference on Data Mining Workshops, 2013

Introduction to Data Analysis and Visualization in Biomedical Informatics Minitrack.
Proceedings of the 46th Hawaii International Conference on System Sciences, 2013

Identifying Pathway Proteins in Networks using Convergence.
Proceedings of the ACM Conference on Bioinformatics, 2013

2012
Function-preserving Filters for Sampling in Biological Networks.
Proceedings of the International Conference on Computational Science, 2012

Empowering Science through Computing, Preface for ICCS 2012.
Proceedings of the International Conference on Computational Science, 2012

Functional identification in correlation networks using gene ontology edge annotation.
I. J. Computational Biology and Drug Design, 2012

The Development of Parallel Adaptive Sampling Algorithms for Analyzing Biological Networks.
Proceedings of the 26th IEEE International Parallel and Distributed Processing Symposium Workshops & PhD Forum, 2012

An energy-aware bioinformatics application for assembling short reads in high performance computing systems.
Proceedings of the 2012 International Conference on High Performance Computing & Simulation, 2012

HPCS 2012 tutorials: Tutorial I: High performance computing in biomedical informatics.
Proceedings of the 2012 International Conference on High Performance Computing & Simulation, 2012

A Novel Multithreaded Algorithm for Extracting Maximal Chordal Subgraphs.
Proceedings of the 41st International Conference on Parallel Processing, 2012

Measuring Social Capital in the Domain of Community Wireless Networks.
Proceedings of the 45th Hawaii International International Conference on Systems Science (HICSS-45 2012), 2012

Human Capital in the Domain of Community Wireless Networks.
Proceedings of the 45th Hawaii International International Conference on Systems Science (HICSS-45 2012), 2012

An efficient overlap graph coarsening approach for modeling short reads.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

On the design of advanced filters for biological networks using graph theoretic properties.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

A meta-genome sequencing and assembly preprocessing algorithm inspired by restriction site base composition.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

Enriching miRNA binding site specificity with sequence profile based filtering of 3'-UTR region of mRNA.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

2011
A Parallel Graph Sampling Algorithm for Analyzing Gene Correlation Networks.
Proceedings of the International Conference on Computational Science, 2011

An energy-aware genetic algorithm for managing self-organized wireless sensor networks.
Proceedings of the IFIP Wireless Days Conference 2011, 2011

A noise reducing sampling approach for uncovering critical properties in large scale biological networks.
Proceedings of the 2011 International Conference on High Performance Computing & Simulation, 2011

A Novel Correlation Networks Approach for the Identification of Gene Targets.
Proceedings of the 44th Hawaii International International Conference on Systems Science (HICSS-44 2011), 2011

Identifying modular function via edge annotation in gene correlation networks using Gene Ontology search.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

Evaluation of essential genes in correlation networks using measures of centrality.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

A New Approach for Sequence Analysis: Illustrating an Expanded Bioinformatics View through Exploring Properties of the Prestin Protein.
Proceedings of the Handbook of Research on Computational and Systems Biology, 2011

2010
Classification and Identification of fungal Sequences Using Characteristic restriction endonuclease Cut Order.
J. Bioinformatics and Computational Biology, 2010

A dynamic energy-aware model for scheduling computationally intensive bioinformatics applications.
Proceedings of the 2010 International Conference on High Performance Computing & Simulation, 2010

An intelligent data-centric approach toward identification of conserved motifs in protein sequences.
Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2009
Improving Network Throughput Using a Fixed Scheduling Scheme and a P-Persistent Approach.
Proceedings of the NTMS 2009, 2009

RFID-based information system for preventing medical errors.
Proceedings of the 6th Annual International Conference on Mobile and Ubiquitous Systems: Computing, 2009

Community wireless networks: Emerging wireless commons for digital inclusion.
Proceedings of the IEEE International Symposium on Technology and Society, 2009

A Computational Method to Predict DNA Copy Number Alterations from Gene Expression Data in Tumor Cases.
Proceedings of the 42st Hawaii International International Conference on Systems Science (HICSS-42 2009), 2009

The Role of Social Capital in the Creation of Community Wireless Networks.
Proceedings of the 42st Hawaii International International Conference on Systems Science (HICSS-42 2009), 2009

Analyzing community contributions to the development of community wireless networks.
Proceedings of the 17th European Conference on Information Systems, 2009

2008
Message Passing Clustering (MPC): a knowledge-based framework for clustering under biological constraints.
IJDMB, 2008

A Hidden Markov Model approach to predicting yeast gene function from sequential gene expression data.
IJBRA, 2008

Self Ranking and Evaluation Approach for Focused Crawler Based on Multi-Agent System.
Int. Arab J. Inf. Technol., 2008

MTAP: The Motif Tool Assessment Platform.
BMC Bioinformatics, 2008

A Dynamic Energy-Aware Algorithm for Self-Optimizing Wireless Sensor Networks.
Proceedings of the Self-Organizing Systems, Third International Workshop, 2008

A Hidden Markov Model Approach for Prediction of Genomic Alterations from Gene Expression Profiling.
Proceedings of the Bioinformatics Research and Applications, 2008

A parallel architecture for regulatory motif algorithm assessment.
Proceedings of the 22nd IEEE International Symposium on Parallel and Distributed Processing, 2008

RFLP-WAVE Analysis for Rapid Identification of Medically Important Fungi.
Proceedings of the 41st Hawaii International International Conference on Systems Science (HICSS-41 2008), 2008

I2MeDS: Intelligent Integrated Medical Data System.
Proceedings of the 2008 International Conference on BioMedical Engineering and Informatics, 2008

Direction Finding Signage System using RFID for Healthcare Applications.
Proceedings of the 2008 International Conference on BioMedical Engineering and Informatics, 2008

A Content-Based Pricing Model for Municipal and Community Wireless Networks.
Proceedings of the Learning from the past & charting the future of the discipline. 14th Americas Conference on Information Systems, 2008

A Graph Theoretic Approach for Analysis and Design of Community Wireless Networks.
Proceedings of the Learning from the past & charting the future of the discipline. 14th Americas Conference on Information Systems, 2008

2007
WLAN-Based Real-Time Asset Tracking System in Healthcare Environments.
Proceedings of the Third IEEE International Conference on Wireless and Mobile Computing, 2007

Dynamic energy aware task scheduling using run-queue peek.
Proceedings of the IASTED International Conference on Parallel and Distributed Computing and Networks, 2007

Applications and Performances of Extended TTDDs in Large-Scale Wireless Sensor Networks.
Proceedings of the Mobile Ad-Hoc and Sensor Networks, Third International Conference, 2007

A Robust Scalable Cluster-Based Multi-hop Routing Protocol for Wireless Sensor Networks.
Proceedings of the Parallel and Distributed Processing and Applications, 2007

Virtual CGH: Prediction of Novel Regions of Chromosomal Alterations in Tumor from Gene Expression Profiling.
Proceedings of the 40th Hawaii International International Conference on Systems Science (HICSS-40 2007), 2007

Minitrack: Advanced Data Management Tools for Biomedical Informatics.
Proceedings of the 40th Hawaii International International Conference on Systems Science (HICSS-40 2007), 2007

Reducing Folding Scenario Candidates in Pseudoknots Detection Using PLMM_DPSS Algorithm Integrated With Energy Filters.
Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

A Typology for Community Wireless Networks Business Models.
Proceedings of the Reaching New Heights. 13th Americas Conference on Information Systems, 2007

2006
A coarse-grain analysis for the performance of measurement-based admission control algorithms.
J. Comput. Meth. in Science and Engineering, 2006

Joint Learning of Gene Functions - a Bayesian Network Model Approach.
J. Bioinformatics and Computational Biology, 2006

Link test - A statistical method for finding prostate cancer biomarkers.
Computational Biology and Chemistry, 2006

Impact of Employing Different Security Levels on QoS Parameters in Virtual Private Networks.
Proceedings of the IASTED International Conference on Parallel and Distributed Computing and Networks, 2006

AdProc: An Adaptive Routing Framework to Provide QoS in Wireless Sensor Networks.
Proceedings of the IASTED International Conference on Parallel and Distributed Computing and Networks, 2006

On the Impact of Employing Various Network Architectures on the Performance of Collaborative Applications.
Proceedings of the IASTED International Conference on Internet and Multimedia Systems and Applications, 2006

Impact of High-Mobility Radio Jamming in Large-Scale Wireless Sensor Networks.
Proceedings of the Emerging Directions in Embedded and Ubiquitous Computing, 2006

On Effective Utilization of Wireless Networks in Collaborative Applications.
Proceedings of the 2nd International ICST Conference on Collaborative Computing: Networking, 2006

On Incorporating QoS Parameters in M-commerce Applications.
Proceedings of the Connecting the Americas. 12th Americas Conference on Information Systems, 2006

Ubiquitous Connectivity: A Framework for Business Models for Wireless Community Networks.
Proceedings of the Connecting the Americas. 12th Americas Conference on Information Systems, 2006

A Genetic Algorithm for Simplifying the Amino Acid Alphabet in Bioinformatics Applications.
Proceedings of the IASTED International Conference on Artificial Intelligence and Applications, 2006

2005
An evolutionary approach to vehicle routing problem with dynamic time and precedence relationships.
J. Comput. Meth. in Science and Engineering, 2005

A method of precise mRNA/DNA homology-based gene structure prediction.
BMC Bioinformatics, 2005

A new approach for gene prediction using comparative sequence analysis.
Proceedings of the 2005 ACM Symposium on Applied Computing (SAC), 2005

A Genetic Real-Time Fault-Tolerant Scheduling Algorithm with Backup Overloading Technique.
Proceedings of the International Conference on Parallel and Distributed Computing Systems, 2005

Fault Tolerant Scheduling of Interval Ordered Tasks with Communication in a Multiprocessor System.
Proceedings of the IASTED International Conference on Parallel and Distributed Computing and Networks, 2005

HYDRA: A New Approach for Integrating Various Wireless Environments.
Proceedings of the 10th IEEE Symposium on Computers and Communications (ISCC 2005), 2005

A new clustering algorithm using message passing and its applications in analyzing microarray data.
Proceedings of the Fourth International Conference on Machine Learning and Applications, 2005

SWAT: A New Spliced Alignment Tool Tailored for Handling More Sequencing Errors.
Proceedings of the Computational Science, 2005

A QoS Based Model for Supporting Multimedia Applications over Cellular IP.
Proceedings of the 38th Hawaii International Conference on System Sciences (HICSS-38 2005), 2005

A Grammar Based Approach for Mining Bioinformatics Databases.
Proceedings of the 38th Hawaii International Conference on System Sciences (HICSS-38 2005), 2005

Introduction to Mini-Track: Advanced Computational Approaches and IT Techniques in Bioinformatics.
Proceedings of the 38th Hawaii International Conference on System Sciences (HICSS-38 2005), 2005

A New QoS Renegotiation Mechanism for Multimedia Applications.
Proceedings of the 38th Hawaii International Conference on System Sciences (HICSS-38 2005), 2005

A New Clustering Strategy with Stochastic Merging and Removing Based on Kernel Functions.
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005

Learning Yeast Gene Functions from Heterogeneous Sources of Data Using Hybrid Weighted Bayesian Networks.
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, 2005

Combinatorial method of splice sites prediction.
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005

A hierarchical virtual-backbone routing approach in ad hoc networks.
Proceedings of the Third IASTED International Conference on Communications and Computer Networks, 2005

Predicting Yeast Gene Function Based on Hidden Markov Models.
Proceedings of the 20th International Conference on Computers and Their Applications, 2005

Protein Motif Searching Through Similar Enriched Parikh Vector Identification.
Proceedings of the Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 2005

On Clustering Biological Data Using Unsupervised and Semi-Supervised Message Passing.
Proceedings of the Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 2005

Message Passing Clustering with Stochastic Merging Based on Kernel Functions.
Proceedings of the A Conference on a Human Scale. 11th Americas Conference on Information Systems, 2005

A Dynamic Bayesian Network Model for Hierarchial Classification and its Application in Predicting Yeast Genes Functions.
Proceedings of the A Conference on a Human Scale. 11th Americas Conference on Information Systems, 2005

An Efficient Accounting Architecture for QoS-aware Internet Traffic.
Proceedings of the A Conference on a Human Scale. 11th Americas Conference on Information Systems, 2005

2004
New graph-based algorithms for partitioning VLSI circuits.
Proceedings of the 2004 International Symposium on Circuits and Systems, 2004

Identification of Mycobacterium Species Using Curated Custom Databases.
Proceedings of the 18th International Parallel and Distributed Processing Symposium (IPDPS 2004), 2004

An Evolutionary Bluetooth Scatternet Formation Protocol.
Proceedings of the 37th Hawaii International Conference on System Sciences (HICSS-37 2004), 2004

Evaluating the Performance of Various Architectures for Wireless Ad Hoc Networks.
Proceedings of the 37th Hawaii International Conference on System Sciences (HICSS-37 2004), 2004

Evaluating Wireless Architectures for GDS Applications.
Proceedings of the 37th Hawaii International Conference on System Sciences (HICSS-37 2004), 2004

Using Enhancing Signals to Improve Specificity of ab initio Splice Site Sensors.
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

Ontology Specific Data Mining Based on Dynamic Grammars.
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

SRPVS: A New Motif Searching Algorithm for Protein Analysis.
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

A New Approach to Clustering Biological Data Using Message Passing.
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

A Hidden Markov Model for Gene Function Prediction from Sequential Expression Data.
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

A Common Interval Searching Algorithm for Protein Sequence Comparison.
Proceedings of the 17th International Conference on Computer Applications in Industry and Engineering, 2004

Adaptive Data Forwarding Techniques for Energy Conservation in Wireless Sensor Networks.
Proceedings of the 17th International Conference on Computer Applications in Industry and Engineering, 2004

A New Fast Fault Tolerant Scheduling Approach in Distributed Systems.
Proceedings of the 17th International Conference on Computer Applications in Industry and Engineering, 2004

2003
A New Approach for Gene Annotation Using Unambiguous Sequence Joining.
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003

A Genetic Algorithm for Simplifying The Amino Acid Alphabet.
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003

RCIS: A Common Interval Searching Algorithm for Amino Acid Sequences.
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003

A Computational Approach to Reconstructing Gene Regulatory Networks.
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003

On Gene Prediction by Cross-Species Comparative Sequence Analysis.
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003

2000
A genetic algorithm for channel routing in VLSI design.
Proceedings of the ISCA 15th International Conference Computers and Their Applications, 2000

1997
A New Approach for Task Scheduling in Distributed Systems.
Proceedings of the IASTED International Conference on Parallel and Distributed Systems, 1997

1996
Extended Abstract: An Augmentation-Based Algorithm for Task Scheduling in Parallel Systems.
Proceedings of the 29th Annual Hawaii International Conference on System Sciences (HICSS-29), 1996

1995
On Optimal Loop Unrolling in Two-processor Scheduling.
Parallel Algorithms Appl., 1995

Static Scheduling of Conditional Branches in Parallel Programs.
J. Parallel Distrib. Comput., 1995

An Optimal Algorithm for Scheduling Interval Ordered Tasks with Communication on N Processors.
J. Comput. Syst. Sci., 1995

Task Scheduling in Multiprocessing Systems.
IEEE Computer, 1995

1994
On the Intractability of Task Allocation in Distributed Systems.
Parallel Processing Letters, 1994

On Considering Communication in Scheduling Task Graphs on Parallel Processors.
Parallel Algorithms Appl., 1994

Task scheduling in parallel and distributed systems.
Prentice Hall series in innovative technology, Prentice Hall, ISBN: 978-0-13-099235-2, 1994

1993
The Time complexity of Scheduling Interval Orders with Communication Is Polynomial.
Parallel Processing Letters, 1993

1992
Scheduling interval ordered tasks on multiprocessor architecture.
Proceedings of the 1992 ACM/SIGAPP Symposium on Applied Computing: Technological Challenges of the 1990's, 1992


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