Hiroyuki Kurata

Orcid: 0000-0003-4254-2214

According to our database1, Hiroyuki Kurata authored at least 29 papers between 2001 and 2024.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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On csauthors.net:

Bibliography

2024
Stack-DHUpred: Advancing the accuracy of dihydrouridine modification sites detection via stacking approach.
Comput. Biol. Medicine, February, 2024

2022
MLAGO: machine learning-aided global optimization for Michaelis constant estimation of kinetic modeling.
BMC Bioinform., 2022

BERT6mA: prediction of DNA N6-methyladenine site using deep learning-based approaches.
Briefings Bioinform., 2022

iACVP: markedly enhanced identification of anti-coronavirus peptides using a dataset-specific word2vec model.
Briefings Bioinform., 2022

2021
Fabrication and Characterisation of Organic EL Devices in the Presence of Cyclodextrin as an Interlayer.
Sensors, 2021

IRC-Fuse: improved and robust prediction of redox-sensitive cysteine by fusing of multiple feature representations.
J. Comput. Aided Mol. Des., 2021

LSTM-PHV: prediction of human-virus protein-protein interactions by LSTM with word2vec.
Briefings Bioinform., 2021

Meta-i6mA: an interspecies predictor for identifying DNA N6-methyladenine sites of plant genomes by exploiting informative features in an integrative machine-learning framework.
Briefings Bioinform., 2021

NeuroPred-FRL: an interpretable prediction model for identifying neuropeptide using feature representation learning.
Briefings Bioinform., 2021

2020
ProIn-Fuse: improved and robust prediction of proinflammatory peptides by fusing of multiple feature representations.
J. Comput. Aided Mol. Des., 2020

iLBE for Computational Identification of Linear B-cell Epitopes by Integrating Sequence and Evolutionary Features.
Genom. Proteom. Bioinform., 2020

2019
Improvement of the memory function of a mutual repression network in a stochastic environment by negative autoregulation.
BMC Bioinform., 2019

2018
SIPMA: A Systematic Identification of Protein-Protein Interactions in Zea mays Using Autocorrelation Features in a Machine-Learning Framework.
Proceedings of the 18th IEEE International Conference on Bioinformatics and Bioengineering, 2018

iLMS, Computational Identification of Lysine-Malonylation Sites by Combining Multiple Sequence Features.
Proceedings of the 18th IEEE International Conference on Bioinformatics and Bioengineering, 2018

2014
Analytical study of robustness of a negative feedback oscillator by multiparameter sensitivity.
BMC Syst. Biol., 2014

BioFNet: biological functional network database for analysis and synthesis of biological systems.
Briefings Bioinform., 2014

2013
Multi-Dimensional Shift Multiplexing Technique with Spherical Reference Waves.
IEICE Trans. Electron., 2013

2012
CADLIVE optimizer: web-based parameter estimation for dynamic models.
Source Code Biol. Medicine, 2012

Biological Design Principles of Complex Feedback Modules in the <i>E. coli</i> Ammonia Assimilation System.
Artif. Life, 2012

2009
Two-phase Search (TPS) Method: Nonbiased and High-speed Parameter Search for Dynamic Models of Biochemical Networks.
Inf. Media Technol., 2009

Genetic modification of flux for flux prediction of mutants.
Bioinform., 2009

2007
Integration of enzyme activities into metabolic flux distributions by elementary mode analysis.
BMC Syst. Biol., 2007

2006
Module-Based Analysis of Robustness Tradeoffs in the Heat Shock Response System.
PLoS Comput. Biol., 2006

Effective and Fast Optimization for a Dynamic Model of the Drosophila Circadian Oscillator.
Proceedings of the IEEE International Conference on Systems, 2006

2005
A grid layout algorithm for automatic drawing of biochemical networks.
Bioinform., 2005

Survival ratio GA for two-evaluation problem in parameter tuning of heat shock response in E. coli.
Proceedings of the IEEE International Conference on Systems, 2005

Reverse Engineering for a Dynamic Model of the Drosophila Circadia Oscillator.
Proceedings of the 2005 International Conference on Computational Intelligence for Modelling Control and Automation (CIMCA 2005), 2005

2002
Robustness analysis of the heat shock response in E. coli.
Proceedings of the American Control Conference, 2002

2001
Feedback regulation of the heat shock response in E. coli.
Proceedings of the 40th IEEE Conference on Decision and Control, 2001


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