# Mustafa Khammash

According to our database

Collaborative distances:

^{1}, Mustafa Khammash authored at least 85 papers between 1992 and 2020.Collaborative distances:

## Awards

## IEEE Fellow

IEEE Fellow 2007, "For contributions to robust control and its applications".

## Timeline

#### Legend:

Book In proceedings Article PhD thesis Other## Links

#### On csauthors.net:

## Bibliography

2020

IEEE Trans. Autom. Control., 2020

Ergodicity Analysis and Antithetic Integral Control of a Class of Stochastic Reaction Networks with Delays.

SIAM J. Appl. Dyn. Syst., 2020

Ergodicity, Output-Controllability, and Antithetic Integral Control of Uncertain Stochastic Reaction Networks.

CoRR, 2020

Stochastic filters based on hybrid approximations of multiscale stochastic reaction networks.

Proceedings of the 59th IEEE Conference on Decision and Control, 2020

2019

Quantification of loading effects in interconnections of stochastic reaction networks.

Proceedings of the 17th European Control Conference, 2019

Bayesian Parameter Estimation for Stochastic Reaction Networks from Steady-State Observations.

Proceedings of the Computational Methods in Systems Biology, 2019

Proceedings of the 58th IEEE Conference on Decision and Control, 2019

Optimal Parameter Tuning of Feedback Controllers with Application to Biomolecular Antithetic Integral Control.

Proceedings of the 58th IEEE Conference on Decision and Control, 2019

A linear constrained integral feedback for a class of reaction systems with absolute concentration robustness.

Proceedings of the 58th IEEE Conference on Decision and Control, 2019

2018

Estimation of Parameter Sensitivities for Stochastic Reaction Networks Using Tau-Leap Simulations.

SIAM J. Numer. Anal., 2018

Computational Identification of Irreducible State-Spaces for Stochastic Reaction Networks.

SIAM J. Appl. Dyn. Syst., 2018

In-Silico Proportional-Integral Moment Control of Stochastic Reaction Networks with Applications to Gene Expression (with Dimerization).

CoRR, 2018

Proceedings of the 57th IEEE Conference on Decision and Control, 2018

2017

Variance reduction for antithetic integral control of stochastic reaction networks.

CoRR, 2017

Simple interval observers for linear impulsive systems with applications to sampled-data and switched systems.

CoRR, 2017

CoRR, 2017

Robust and structural ergodicity analysis of stochastic biomolecular networks involving synthetic antithetic integral controllers.

CoRR, 2017

BMC Syst. Biol., 2017

Proceedings of the 56th IEEE Annual Conference on Decision and Control, 2017

Proceedings of the IEEE Conference on Control Technology and Applications, 2017

2016

Implementation Considerations, Not Topological Differences, Are the Main Determinants of Noise Suppression Properties in Feedback and Incoherent Feedforward Circuits.

PLoS Comput. Biol., 2016

Interval peak-to-peak observers for continuous- and discrete-time systems with persistent inputs and delays.

Autom., 2016

Approximate filtering distributions for characterizing input-output behavior of biochemical networks.

Proceedings of the 15th European Control Conference, 2016

Proceedings of the 55th IEEE Conference on Decision and Control, 2016

Robust ergodicity and tracking in antithetic integral control of stochastic biochemical reaction networks.

Proceedings of the 55th IEEE Conference on Decision and Control, 2016

2015

Proceedings of the Encyclopedia of Systems and Control, 2015

Proceedings of the Encyclopedia of Systems and Control, 2015

CoRR, 2015

Proceedings of the 54th IEEE Conference on Decision and Control, 2015

2014

Automatic Crosswind Flight of Tethered Wings for Airborne Wind Energy: Modeling, Control Design, and Experimental Results.

IEEE Trans. Control. Syst. Technol., 2014

IEEE Trans. Control. Syst. Technol., 2014

Overexpression of Heat Shock Protein 72 Attenuates NF-κB Activation Using a Combination of Regulatory Mechanisms in Microglia.

PLoS Comput. Biol., 2014

PLoS Comput. Biol., 2014

A Scalable Computational Framework for Establishing Long-Term Behavior of Stochastic Reaction Networks.

PLoS Comput. Biol., 2014

CoRR, 2014

Optimization-based Lyapunov function construction for continuous-time Markov chains with affine transition rates.

Proceedings of the 53rd IEEE Conference on Decision and Control, 2014

Detection of loading effects in bacterial stress response using biochemical stochasticity.

Proceedings of the 53rd IEEE Conference on Decision and Control, 2014

2013

Unbiased Estimation of Parameter Sensitivities for Stochastic Chemical Reaction Networks.

SIAM J. Sci. Comput., 2013

PLoS Comput. Biol., 2013

SPSens: a software package for stochastic parameter sensitivity analysis of biochemical reaction networks.

Bioinform., 2013

The signal within the noise: efficient inference of stochastic gene regulation models using fluorescence histograms and stochastic simulations.

Bioinform., 2013

Automatic control of tethered wings for airborne wind energy: Design and experimental results.

Proceedings of the 12th European Control Conference, 2013

Direct numerical solution of algebraic Lyapunov equations for large-scale systems using Quantized Tensor Trains.

Proceedings of the 52nd IEEE Conference on Decision and Control, 2013

Proceedings of the 52nd IEEE Conference on Decision and Control, 2013

Proceedings of the 52nd IEEE Conference on Decision and Control, 2013

Proceedings of the American Control Conference, 2013

Proceedings of the American Control Conference, 2013

2012

Simulation of stochastic systems via polynomial chaos expansions and convex optimization

CoRR, 2012

Stability analysis of quasi-polynomial dynamical systems with applications to biological network models.

Autom., 2012

A spectral methods-based solution of the Chemical Master Equation for gene regulatory networks.

Proceedings of the 51th IEEE Conference on Decision and Control, 2012

Measurement noise distribution as a metric for parameter estimation in dynamical systems.

Proceedings of the 51th IEEE Conference on Decision and Control, 2012

Nonlinear stochastic model predictive control via regularized polynomial chaos expansions.

Proceedings of the 51th IEEE Conference on Decision and Control, 2012

Computer control of gene expression: Robust setpoint tracking of protein mean and variance using integral feedback.

Proceedings of the 51th IEEE Conference on Decision and Control, 2012

2011

Quantitative characterization and analysis of the dynamic NF-kappaB response in microglia.

BMC Bioinform., 2011

Flow cytometry based state aggregation of a stochastic model of protein expression.

Proceedings of the 50th IEEE Conference on Decision and Control and European Control Conference, 2011

Model selection in stochastic chemical reaction networks using flow cytometry data.

Proceedings of the 50th IEEE Conference on Decision and Control and European Control Conference, 2011

2010

PLoS Comput. Biol., 2010

Analysis of Stochastic Strategies in Bacterial Competence: A Master Equation Approach.

PLoS Comput. Biol., 2010

Int. J. Syst. Sci., 2010

Proceedings of the 49th IEEE Conference on Decision and Control, 2010

Proceedings of the 49th IEEE Conference on Decision and Control, 2010

Parameter identification of biological networks using extended Kalman filtering and χ<sup>2</sup> criteria.

Proceedings of the 49th IEEE Conference on Decision and Control, 2010

2008

IEEE Trans. Control. Syst. Technol., 2008

The Finite State Projection Approach for the Analysis of Stochastic Noise in Gene Networks.

IEEE Trans. Autom. Control., 2008

IEEE Trans. Autom. Control., 2008

Using noise transmission properties to identify stochastic gene regulatory networks.

Proceedings of the 47th IEEE Conference on Decision and Control, 2008

Proceedings of the American Control Conference, 2008

2007

A multiple time interval finite state projection algorithm for the solution to the chemical master equation.

J. Comput. Phys., 2007

Proceedings of the 46th IEEE Conference on Decision and Control, 2007

Proceedings of the American Control Conference, 2007

Stochastic analysis of gene regulatory networks using finite state projections and singular perturbation.

Proceedings of the American Control Conference, 2007

2006

PLoS Comput. Biol., 2006

Proc. IEEE, 2006

A reduced model solution for the chemical master equation arising in stochastic analyses of biological networks.

Proceedings of the 45th IEEE Conference on Decision and Control, 2006

Coherence Resonance: A Mechanism for Noise Induced Stable Oscillations in Gene Regulatory Networks.

Proceedings of the 45th IEEE Conference on Decision and Control, 2006

2004

IEEE Trans. Autom. Control., 2004

2001

IEEE Trans. Autom. Control., 2001

Analysis of steady-state tracking errors in sampled-data systems with uncertainty.

Autom., 2001

2000

A new approach to the solution of the l<sub>1</sub> control problem: the scaled-Q method.

IEEE Trans. Autom. Control., 2000

Proceedings of the 1st IEEE International Symposium on Bioinformatics and Biomedical Engineering, 2000

1998

Proceedings of the Robustness in Identification and Control, Workshop Robustness in Identification and Control, Siena, Italy, July 30, 1998

1993

Autom., 1993

1992

Time-varying control and the robust performance of systems with structured norm-bounded perturbations.

Autom., 1992