Hongliang Duan

According to our database, Hongliang Duan authored at least 12 papers between 2019 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Predicting the structures of cyclic peptides containing unnatural amino acids by HighFold2.

Cheng Zhu, Sen Cao, Tianfeng Shang, Jingjing Guo, An Su, Chengxi Li, Hongliang Duan

Briefings Bioinform., May, 2025

CycleDesigner: Leveraging CycRFdiffusion and HighFold to Design Cyclic Peptide Binders for Specific Targets.

Chenhao Zhang, Zhenyu Xu, Kang Lin, Ning Zhu, Chengyun Zhang, Wen Xu, Jingjing Guo, An Su, Chengxi Li, Hongliang Duan

J. Chem. Inf. Model., 2025

AlphaFold3 for Noncanonical Cyclic Peptide Modeling: Hierarchical Benchmarking Reveals Accuracy and Practical Guidelines.

Chengyun Zhang, Wentong Wang, Ning Zhu, Zhigang Cao, Yaling Wu, Qingyi Mao, Cheng Zhu, Chenhao Zhang, Jingjing Guo, Hongliang Duan

J. Chem. Inf. Model., 2025

2024

Transfer learning across different chemical domains: virtual screening of organic materials with deep learning models pretrained on small molecule and chemical reaction data.

Chengwei Zhang, Yushuang Zhai, Ziyang Gong, Hongliang Duan, Yuan-Bin She, Yun-Fang Yang, An Su

J. Cheminformatics, December, 2024

GAPS: a geometric attention-based network for peptide binding site identification by the transfer learning approach.

Cheng Zhu, Chengyun Zhang, Tianfeng Shang, Chenhao Zhang, Silong Zhai, Lujing Cao, Zhenyu Xu, Zhihao Su, Ying Song, An Su, Chengxi Li, Hongliang Duan

Briefings Bioinform., July, 2024

HighFold: accurately predicting structures of cyclic peptides and complexes with head-to-tail and disulfide bridge constraints.

Chenhao Zhang, Chengyun Zhang, Tianfeng Shang, Ning Zhu, Xinyi Wu, Hongliang Duan

Briefings Bioinform., May, 2024

NanoCon: contrastive learning-based deep hybrid network for nanopore methylation detection.

Chenglin Yin, Ruheng Wang, Jianbo Qiao, Hua Shi, Hongliang Duan, Xinbo Jiang, Saisai Teng, Leyi Wei

Bioinform., February, 2024

2023

Efficient Computational Framework for Target-Specific Active Peptide Discovery: A Case Study on IL-17C Targeting Cyclic Peptides.

Zhipeng Wu, Yejian Wu, Cheng Zhu, Xinyi Wu, Silong Zhai, Xinqiao Wang, Zhihao Su, Hongliang Duan

J. Chem. Inf. Model., December, 2023

2022

Self-Supervised Molecular Pretraining Strategy for Low-Resource Reaction Prediction Scenarios.

Zhipeng Wu, Xiang Cai, Chengyun Zhang, Haoran Qiao, Yejian Wu, Yun Zhang, Xinqiao Wang, Haiying Xie, Feng Luo, Hongliang Duan

J. Chem. Inf. Model., 2022

From theory to experiment: transformer-based generation enables rapid discovery of novel reactions.

Xinqiao Wang, Chuansheng Yao, Yun Zhang, Jiahui Yu, Haoran Qiao, Chengyun Zhang, Yejian Wu, Renren Bai, Hongliang Duan

J. Cheminformatics, 2022

2021

Outage Performance of Full-Duplex Relay Networks Powered by RF Power Station in Ubiquitous Electric Internet of Things.

Yu Zhang, Xiaofei Di, Hongliang Duan, Xi Yang, Peng Wu, Baoguo Shan

Wirel. Commun. Mob. Comput., 2021

2019

Retrosynthesis with Attention-Based NMT Model and Chemical Analysis of the "Wrong" Predictions.

Hongliang Duan, Ling Wang, Chengyun Zhang, Jianjun Li

CoRR, 2019