Jaewoon Jung
Orcid: 0000-0002-2285-4432
According to our database1,
Jaewoon Jung
authored at least 11 papers
between 2011 and 2025.
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Bibliography
2025
Scaling molecular dynamics for large-scale simulation of biological systems on AMD CPU/GPU supercomputers: Lessons from LUMI: Optimizing GENESIS for maximizing the computational efficiency of CPU and GPU kernels on the LUMI supercomputer.
Proceedings of the International Conference on High Performance Computing in Asia-Pacific Region, 2025
2023
Acceleration of generalized replica exchange with solute tempering simulations of large biological systems on massively parallel supercomputer.
J. Comput. Chem., 2023
2022
Implementation of residue-level coarse-grained models in GENESIS for large-scale molecular dynamics simulations.
PLoS Comput. Biol., 2022
2021
New parallel computing algorithm of molecular dynamics for extremely huge scale biological systems.
J. Comput. Chem., 2021
2019
Scaling molecular dynamics beyond 100, 000 processor cores for large-scale biophysical simulations.
J. Comput. Chem., 2019
2017
GENESIS 1.1: A hybrid-parallel molecular dynamics simulator with enhanced sampling algorithms on multiple computational platforms.
J. Comput. Chem., 2017
Multiple program/multiple data molecular dynamics method with multiple time step integrator for large biological systems.
J. Comput. Chem., 2017
2016
Parallel implementation of 3D FFT with volumetric decomposition schemes for efficient molecular dynamics simulations.
Comput. Phys. Commun., 2016
2014
Midpoint cell method for hybrid (MPI+OpenMP) parallelization of molecular dynamics simulations.
J. Comput. Chem., 2014
2013
J. Comput. Chem., 2013
2011
Geometrically associative yet electronically dissociative character in the transition state of enzymatic reversible phosphorylation.
J. Comput. Chem., 2011