Jaime I. Dávila

According to our database, Jaime I. Dávila authored at least 17 papers between 2004 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Excerno: Using Mutational Signatures in Sequencing Data to Filter False Variants Caused by Clinical Archival.

Audrey Mitchell, Marco Ruiz, Soua Yang, Chen Wang, Jaime I. Dávila

J. Comput. Biol., April, 2023

2021

Semi-Supervised Topological Analysis for Elucidating Hidden Structures in High-Dimensional Transcriptome Datasets.

Tianshu Feng, Jaime I. Dávila, Yuanhang Liu, Sangdi Lin, Shuai Huang, Chen Wang

IEEE ACM Trans. Comput. Biol. Bioinform., 2021

Excerno: Filtering Mutations Caused by the Clinical Archival Process in Sequencing Data.

Audrey Mitchell, Marco Ruiz, Soua Yang, Chen Wang, Jaime I. Dávila

Proceedings of the Computational Advances in Bio and Medical Sciences: 11th International Conference, 2021

2018

Approximation Algorithms for the Primer Selection, PlantedMotif Search, and Related Problems.

Sudha Balla, Jaime I. Dávila, Marius Nicolae, Sanguthevar Rajasekaran

Proceedings of the Handbook of Approximation Algorithms and Metaheuristics, 2018

2017

Challenges of using RNA-seq in the clinical setting.

Jaime I. Dávila

Proceedings of the 7th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2017

2015

Bioinformatics Strategies for Identifying Regions of Epigenetic Deregulation Associated with Aberrant Transcript Splicing and RNA-editing.

Mia D. Champion, Ryan A. Hlady, Huihuang Yan, Jared Evans, Jeff Nie, Jeong-Heon Lee, James M. Bogenberger, Kannabiran Nandakumar, Jaime I. Dávila, Raymond M. Moore, Asha A. Nair, Daniel R. O'Brien, Yuan-Xiao Zhu, K. Martin Kortüm, Tamas Ordog, Zhiguo Zhang, Richard W. Joseph, A. Keith Stewart, Jean-Pierre A. Kocher, Eric Jonasch, Keith D. Robertson, Raoul Tibes, Thai H. Ho

Proceedings of the BIOINFORMATICS 2015, 2015

2014

MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing.

Krishna R. Kalari, Asha A. Nair, Jaysheel D. Bhavsar, Daniel R. O'Brien, Jaime I. Dávila, Matthew A. Bockol, Jinfu J. Nie, Xiaojia Tang, Saurabh Baheti, Jay B. Doughty, Sumit Middha, Hugues Sicotte, E. Aubrey Thompson, Yan W. Asmann, Jean-Pierre A. Kocher

BMC Bioinform., 2014

RVboost: RNA-seq variants prioritization using a boosting method.

Chen Wang, Jaime I. Dávila, Saurabh Baheti, Aditya Bhagwate, Xue Wang, Jean-Pierre A. Kocher, Susan L. Slager, Andrew L. Feldman, Anne J. Novak, James R. Cerhan, E. Aubrey Thompson, Yan W. Asmann

Bioinform., 2014

2007

Randomized Packet Routing, Selection, and Sorting on the POPS Network.

Sanguthevar Rajasekaran, Jaime I. Dávila

Proceedings of the Handbook of Parallel Computing - Models, Algorithms and Applications., 2007

Approximation Algorithms for the Primer Selection, Planted Motif Search, and Related Problems.

Sudha Balla, Jaime I. Dávila, Sanguthevar Rajasekaran

Proceedings of the Handbook of Approximation Algorithms and Metaheuristics., 2007

Fast and Practical Algorithms for Planted (l, d) Motif Search.

Jaime I. Dávila, Sudha Balla, Sanguthevar Rajasekaran

IEEE ACM Trans. Comput. Biol. Bioinform., 2007

Fast Algorithms for Selecting Specific siRNA in Complete mRNA Data.

Jaime I. Dávila, Sudha Balla, Sanguthevar Rajasekaran

Proceedings of the Algorithms in Bioinformatics, 7th International Workshop, 2007

2006

Space and Time Efficient Algorithms for Planted Motif Search.

Jaime I. Dávila, Sudha Balla, Sanguthevar Rajasekaran

Proceedings of the Computational Science, 2006

Extending Pattern Branching to Handle Challenging Instances.

Jaime I. Dávila, Sanguthevar Rajasekaran

Proceedings of the Sixth IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2006), 2006

2005

Packet routing and selection on the POPS network.

Sanguthevar Rajasekaran, Jaime I. Dávila

J. Parallel Distributed Comput., 2005

Randomized Sorting On The Pops Network.

Jaime I. Dávila, Sanguthevar Rajasekaran

Int. J. Found. Comput. Sci., 2005

2004

A Fundamental Problem in Computer and Communication.

Sanguthevar Rajasekaran, Jaime I. Dávila

Proceedings of the 10th International Conference on Parallel and Distributed Systems, 2004