Jim Zhanwen Li

According to our database, Jim Zhanwen Li authored at least 26 papers between 2003 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

FATCAT 2.0: towards a better understanding of the structural diversity of proteins.

Zhanwen Li, Lukasz Jaroszewski, Mallika Iyer, Mayya Sedova, Adam Godzik

Nucleic Acids Res., 2020

2019

Cancer3D 2.0: interactive analysis of 3D patterns of cancer mutations in cancer subsets.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W. Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik

Nucleic Acids Res., 2019

2017

Adaptive Cloud Deployment Using Persistence Strategies and Application Awareness.

Jim Zhanwen Li, C. Murray Woodside, John W. Chinneck, Marin Litoiu

IEEE Trans. Cloud Comput., 2017

2016

PDBFlex: exploring flexibility in protein structures.

Thomas Hrabe, Zhanwen Li, Mayya Sedova, Piotr Rotkiewicz, Lukasz Jaroszewski, Adam Godzik

Nucleic Acids Res., 2016

2015

AIDA: <i>ab initio</i> domain assembly for automated multi-domain protein structure prediction and domain-domain interaction prediction.

Dong Xu, Lukasz Jaroszewski, Zhanwen Li, Adam Godzik

Bioinform., 2015

2014

AIDA: <i>ab initio</i> domain assembly server.

Dong Xu, Lukasz Jaroszewski, Zhanwen Li, Adam Godzik

Nucleic Acids Res., 2014

POSA: a user-driven, interactive multiple protein structure alignment server.

Zhanwen Li, Padmaja Natarajan, Yuzhen Ye, Thomas Hrabe, Adam Godzik

Nucleic Acids Res., 2014

bNAber: database of broadly neutralizing HIV antibodies.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai W. Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik

Nucleic Acids Res., 2014

Structural genomics analysis of uncharacterized protein families overrepresented in human gut bacteria identifies a novel glycoside hydrolase.

Anna Sheydina, Ruth Y. Eberhardt, Daniel J. Rigden, Yuanyuan Chang, Zhanwen Li, Christian M. Zmasek, Herbert L. Axelrod, Adam Godzik

BMC Bioinform., 2014

FFAS-3D: improving fold recognition by including optimized structural features and template re-ranking.

Dong Xu, Lukasz Jaroszewski, Zhanwen Li, Adam Godzik

Bioinform., 2014

2013

Cloud API issues: an empirical study and impact.

Qinghua Lu, Liming Zhu, Len Bass, Xiwei Xu, Zhanwen Li, Hiroshi Wada

Proceedings of the 9th international ACM SIGSOFT conference on Quality of Software Architectures, 2013

Challenges to Error Diagnosis in Hadoop Ecosystems.

Jim Zhanwen Li, Siyuan He, Liming Zhu, Xiwei Xu, Min Fu, Len Bass, Anna Liu, An Binh Tran

Proceedings of the Lucky LISA: Proceedings of the 27th Large Installation System Administration Conference, 2013

Availability analysis for deployment of in-cloud applications.

Xiwei Xu, Qinghua Lu, Liming Zhu, Zhanwen Li, Sherif Sakr, Hiroshi Wada, Ingo Weber

Proceedings of the 4th international ACM Sigsoft symposium on Architecting critical systems, 2013

Modeling and analysing operation processes for dependability.

Xiwei Xu, Liming Zhu, Jim Zhanwen Li, Len Bass, Qinghua Lu, Min Fu

Proceedings of the 2013 43rd Annual IEEE/IFIP International Conference on Dependable Systems and Networks (DSN), 2013

Incorporating Uncertainty into In-Cloud Application Deployment Decisions for Availability.

Qinghua Lu, Xiwei Xu, Liming Zhu, Len Bass, Zhanwen Li, Sherif Sakr, Paul L. Bannerman, Anna Liu

Proceedings of the 2013 IEEE Sixth International Conference on Cloud Computing, Santa Clara, CA, USA, June 28, 2013

Improving Availability of Cloud-Based Applications through Deployment Choices.

Jim Zhanwen Li, Qinghua Lu, Liming Zhu, Len Bass, Xiwei Xu, Sherif Sakr, Paul L. Bannerman, Anna Liu

Proceedings of the 2013 IEEE Sixth International Conference on Cloud Computing, Santa Clara, CA, USA, June 28, 2013

2011

FFAS server: novel features and applications.

Lukasz Jaroszewski, Zhanwen Li, Xiao-hui Cai, Christoph Weber, Adam Godzik

Nucleic Acids Res., 2011

2009

Fast scalable optimization to configure service systems having cost and quality of service constraints.

Jim Zhanwen Li, John W. Chinneck, C. Murray Woodside, Marin Litoiu

Proceedings of the 6th International Conference on Autonomic Computing, 2009

Deployment of Services in a Cloud Subject to Memory and License Constraints.

Jim Zhanwen Li, John W. Chinneck, C. Murray Woodside, Marin Litoiu

Proceedings of the IEEE International Conference on Cloud Computing, 2009

2007

Using an alignment of fragment strings for comparing protein structures.

Iddo Friedberg, Tim Harder, Rachel Kolodny, Einat Sitbon, Zhanwen Li, Adam Godzik

Bioinform., 2007

Explicitly Controlling the Fair Service for Busy Web Servers.

Zhanwen Li, David Levy, Shiping Chen, John Zic

Proceedings of the 18th Australian Software Engineering Conference (ASWEC 2007), 2007

2006

Flexible Structural Neighborhood - a database of protein structural similarities and alignments.

Zhanwen Li, Yuzhen Ye, Adam Godzik

Nucleic Acids Res., 2006

Modeling and Analyzing Three-Dimensional Structures of Human Disease Proteins.

Yuzhen Ye, Zhanwen Li, Adam Godzik

Proceedings of the Biocomputing 2006, 2006

Auto-tune design and evaluation on staged event-driven architecture.

Zhanwen Li, David Levy, Shiping Chen, John Zic

Proceedings of the 1st workshop on MOdel Driven Development for Middleware, 2006

2005

FFAS03: a server for profile-profile sequence alignments.

Lukasz Jaroszewski, Leszek Rychlewski, Zhanwen Li, Weizhong Li, Adam Godzik

Nucleic Acids Res., 2005

2003

Restarted GMRES Augmented with Eigenvectors for Shifted Linear Systems.

Gui-Ding Gu, Jian-Jun Zhang, Zhanwen Li

Int. J. Comput. Math., 2003