John L. Spouge
Orcid: 0000-0001-6207-1419
According to our database1,
John L. Spouge
authored at least 21 papers
between 1991 and 2023.
Collaborative distances:
Collaborative distances:
Timeline
Legend:
Book In proceedings Article PhD thesis Dataset OtherLinks
On csauthors.net:
Bibliography
2023
2022
A closed formula relevant to 'Theory of local k-mer selection with applications to long-read alignment' by Jim Shaw and Yun William Yu.
Bioinform., October, 2022
2020
A linear-time algorithm that avoids inverses and computes Jackknife (leave-one-out) products like convolutions or other operators in commutative semigroups.
Algorithms Mol. Biol., 2020
2019
BMC Bioinform., 2019
2016
Most of the tight positional conservation of transcription factor binding sites near the transcription start site reflects their co-localization within regulatory modules.
BMC Bioinform., 2016
Bioinform., 2016
2015
IEEE ACM Trans. Comput. Biol. Bioinform., 2015
2014
Searching for repeats, as an example of using the generalised Ruzzo-Tompa algorithm to find optimal subsequences with gaps.
Int. J. Bioinform. Res. Appl., 2014
2013
Proceedings of the Advances in Bioinformatics and Computational Biology, 2013
2012
Software: an open-source and scalable framework for exact calculations in coalescent theory.
BMC Bioinform., 2012
The ruzzo-tompa algorithm can find the maximal paths in weighted, directed graphs on a one-dimensional lattice.
Proceedings of the IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, 2012
2010
Threshold Average Precision (TAP-<i>k</i>): a measure of retrieval designed for bioinformatics.
Bioinform., 2010
2008
Finding sequence motifs with Bayesian models incorporating positional information: an application to transcription factor binding sites.
BMC Bioinform., 2008
2006
Scanning sequences after Gibbs sampling to find multiple occurrences of functional elements.
BMC Bioinform., 2006
Adding sequence context to a Markov background model improves the identification of regulatory elements.
Bioinform., 2006
2005
Alignments anchored on genomic landmarks can aid in the identification of regulatory elements.
Proceedings of the Proceedings Thirteenth International Conference on Intelligent Systems for Molecular Biology 2005, 2005
2004
2002
The Efficient Computation of Position-Specific Match Scores with the Fast Fourier Transform.
J. Comput. Biol., 2002
Bioinform., 2002
1991