Martin C. Frith

According to our database1, Martin C. Frith authored at least 25 papers between 1998 and 2020.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

Homepages:

On csauthors.net:

Bibliography

2020
How sequence alignment scores correspond to probability models.
Bioinformatics, 2020

2018
A Simplified Description of Child Tables for Sequence Similarity Search.
IEEE/ACM Trans. Comput. Biology Bioinform., 2018

2017
Variable-order sequence modeling improves bacterial strain discrimination for Ion Torrent DNA reads.
BMC Bioinformatics, 2017

Training alignment parameters for arbitrary sequencers with LAST-TRAIN.
Bioinformatics, 2017

2016
ALP & FALP: C++ libraries for pairwise local alignment E-values.
Bioinformatics, 2016

2015
A Genetic Algorithm for Motif Finding Based on Statistical Significance.
Proceedings of the Bioinformatics and Biomedical Engineering, 2015

2014
A promoter-level mammalian expression atlas.
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Nature, 2014

Frameshift alignment: statistics and post-genomic applications.
Bioinformatics, 2014

A bioinformatician's guide to the forefront of suffix array construction algorithms.
Briefings in Bioinformatics, 2014

2013
An approximate Bayesian approach for mapping paired-end DNA reads to a reference genome.
Bioinformatics, 2013

2012
RecountDB: a database of mapped and count corrected transcribed sequences.
Nucleic Acids Research, 2012

Adding unaligned sequences into an existing alignment using MAFFT and LAST.
Bioinformatics, 2012

2011
CentroidHomfold-LAST: accurate prediction of RNA secondary structure using automatically collected homologous sequences.
Nucleic Acids Research, 2011

Probabilistic alignments with quality scores: an application to short-read mapping toward accurate SNP/indel detection.
Bioinformatics, 2011

2010
Parameters for accurate genome alignment.
BMC Bioinformatics, 2010

2009
MEME SUITE: tools for motif discovery and searching.
Nucleic Acids Research, 2009

2008
Discovering Sequence Motifs with Arbitrary Insertions and Deletions.
PLoS Computational Biology, 2008

2007
Large-scale clustering of CAGE tag expression data.
BMC Bioinformatics, 2007

2004
CARRIE web service: automated transcriptional regulatory network inference and interactive analysis.
Nucleic Acids Research, 2004

MotifViz: an analysis and visualization tool for motif discovery.
Nucleic Acids Research, 2004

2003
Cluster-Buster: finding dense clusters of motifs in DNA sequences.
Nucleic Acids Research, 2003

Theatre: a software tool for detailed comparative analysis and visualization of genomic sequence.
Nucleic Acids Research, 2003

SeqVISTA: a graphical tool for sequence feature visualization and comparison.
BMC Bioinformatics, 2003

2001
Detection of cis -element clusters in higher eukaryotic DNA.
Bioinformatics, 2001

1998
Theatre: A Novel Tool For The Comparative Investigation and Display of Evolutionary Diversity of Functional and Structural Features in DNA Sequences.
Proceedings of the German Conference on Bioinformatics, 1998


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