Jonas Paulsen

According to our database, Jonas Paulsen authored at least 8 papers between 2013 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

StripePy: fast and robust characterization of architectural stripes.

Andrea Raffo, Roberto Rossini, Jonas Paulsen

Bioinform., 2025

2024

hictk: blazing fast toolkit to work with .hic and .cool files.

Roberto Rossini, Jonas Paulsen

Bioinform., 2024

2023

The shape of chromatin: insights from computational recognition of geometric patterns in Hi-C data.

Andrea Raffo, Jonas Paulsen

Briefings Bioinform., September, 2023

2016

Galaxy Portal: interacting with the galaxy platform through mobile devices.

Claus Børnich, Ivar Grytten, Eivind Hovig, Jonas Paulsen, Martin Cech, Geir Kjetil Sandve

Bioinform., 2016

2015

Manifold Based Optimization for Single-Cell 3D Genome Reconstruction.

Jonas Paulsen, Odin Gramstad, Philippe Collas

PLoS Comput. Biol., 2015

2014

Inferential analysis of genomic 3D organization.

Jonas Paulsen

PhD thesis, 2014

HiBrowse: multi-purpose statistical analysis of genome-wide chromatin 3D organization.

Jonas Paulsen, Geir Kjetil Sandve, Sveinung Gundersen, Tonje Lien, Kai Trengereid, Eivind Hovig

Bioinform., 2014

2013

The Genomic HyperBrowser: an analysis web server for genome-scale data.

Geir Kjetil Sandve, Sveinung Gundersen, Morten Johansen, Ingrid Kristine Glad, Krishanthi Gunathasan, Lars Holden, Marit Holden, Knut Liestøl, Ståle Nygård, Vegard Nygaard, Jonas Paulsen, Halfdan Rydbeck, Kai Trengereid, Trevor Clancy, Finn Drabløs, Egil Ferkingstad, Matús Kalas, Tonje Lien, Morten Rye, Arnoldo Frigessi, Eivind Hovig

Nucleic Acids Res., 2013