Dukka B. KC

According to our database, Dukka B. KC authored at least 22 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Benchmarking a Wide Range of Unsupervised Learning Methods for Detecting Anomaly in Blast Furnace.

Kendai Itakura, Dukka Bahadur, Hiroto Saigo

Proceedings of the 13th International Conference on Pattern Recognition Applications and Methods, 2024

2023

pLMSNOSite: an ensemble-based approach for predicting protein S-nitrosylation sites by integrating supervised word embedding and embedding from pre-trained protein language model.

Pawel Pratyush, Suresh Pokharel, Hiroto Saigo, Dukka B. KC

BMC Bioinform., December, 2023

Experimental Study: Deep Learning-Based Fall Monitoring among Older Adults with Skin-Wearable Electronics.

Yongkuk Lee, Suresh Pokharel, Asra Al Muslim, Dukka B. KC, Kyoung Hag Lee, Woon-Hong Yeo

Sensors, 2023

2022

Correction: DeepSuccinylSite: a deep learning based approach for protein succinylation site prediction.

Niraj Thapa, Meenal Chaudhari, Sean McManus, Kaushik Roy, Robert H. Newman, Hiroto Saigo, K. C. Dukka B.

BMC Bioinform., 2022

GPU-I-TASSER: a GPU accelerated I-TASSER protein structure prediction tool.

Elijah A. MacCarthy, Chengxin Zhang, Yang Zhang, Dukka B. KC

Bioinform., 2022

2020

DeepSuccinylSite: a deep learning based approach for protein succinylation site prediction.

Niraj Thapa, Meenal Chaudhari, Sean McManus, Kaushik Roy, Robert H. Newman, Hiroto Saigo, Dukka B. KC

BMC Bioinform., April, 2020

Comparison of Machine Learning and Deep Learning Models for Network Intrusion Detection Systems.

Niraj Thapa, Zhipeng Liu, Dukka B. KC, Balakrishna Gokaraju, Kaushik Roy

Future Internet, 2020

2018

RF-NR: Random Forest Based Approach for Improved Classification of Nuclear Receptors.

Hamid D. Ismail, Hiroto Saigo, K. C. Dukka B.

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

2017

CNN-BLPred: a Convolutional neural network based predictor for β-Lactamases (BL) and their classes.

Clarence White, Hamid D. Ismail, Hiroto Saigo, K. C. Dukka B.

BMC Bioinform., 2017

Recent advances in sequence-based protein structure prediction.

K. C. Dukka B.

Briefings Bioinform., 2017

2015

Phosphorylation sites prediction using Random Forest.

Hamid D. Ismail, Ahoi Jones, Jung H. Kim, Robert H. Newman, K. C. Dukka B.

Proceedings of the 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2015

RF-Phos: Random forest-based prediction of phosphorylation sites.

Ahoi Jones, Hamid D. Ismail, Jung H. Kim, Robert H. Newman, K. C. Dukka B.

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014

Time-series forecasting with evolvable partially connected artificial neural network.

Mina Moradi Kordmahalleh, Mohammad Gorji Sefidmazgi, Abdollah Homaifar, K. C. Dukka Bahadur, Anthony Guiseppi-Elie

Proceedings of the Genetic and Evolutionary Computation Conference, 2014

2013

Hierarchical multi-label gene function prediction using adaptive mutation in crowding niching.

Mina Moradi Kordmahalleh, Abdollah Homaifar, K. C. Dukka Bahadur

Proceedings of the 13th IEEE International Conference on BioInformatics and BioEngineering, 2013

2011

Topology Improves Phylogenetic Motif Functional Site Predictions.

K. C. Dukka Bahadur, Dennis R. Livesay

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

2008

Improving position-specific predictions of protein functional sites using phylogenetic motifs.

K. C. Dukka Bahadur, Dennis R. Livesay

Bioinform., 2008

2006

Clique-based algorithms for protein structure prediction.

Dukka Bahadur

PhD thesis, 2006

Protein Threading with Profiles and Distance Constraints Using Clique Based Algorithms.

K. C. Dukka Bahadur, Etsuji Tomita, Jun'ichi Suzuki, Katsuhisa Horimoto, Tatsuya Akutsu

J. Bioinform. Comput. Biol., 2006

Dynamic Programming and Clique Based Approaches for Protein Threading with Profiles and Constraints.

Tatsuya Akutsu, Morihiro Hayashida, Dukka Bahadur, Etsuji Tomita, Jun'ichi Suzuki, Katsuhisa Horimoto

IEICE Trans. Fundam. Electron. Commun. Comput. Sci., 2006

2005

Protein Side-chain Packing Problem: a Maximum Edge-weight Clique Algorithmic Approach.

K. C. Dukka Bahadur, Etsuji Tomita, Jun'ichi Suzuki, Tatsuya Akutsu

J. Bioinform. Comput. Biol., 2005

Clique-based algorithms for protein threading with profiles and constraints.

Dukka Bahadur, Etsuji Tomita, Jun'ichi Suzuki, Katsuhisa Horimoto, Tatsuya Akutsu

Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore, 2005

2004

Protein Side-chain Packing Problem: A Maximum Edge-weight Clique Algorithmic Approach.

Dukka Bahadur, Tatsuya Akutsu, Etsuji Tomita, Tomokazu Seki

Proceedings of the Second Asia-Pacific Bioinformatics Conference (APBC 2004), 2004