Kevin Karplus

According to our database1, Kevin Karplus authored at least 32 papers between 1981 and 2015.

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Bibliography

2015
Analysis of nanopore data using hidden Markov models.
Bioinform., 2015

2011
Identification of prokaryotic small proteins using a comparative genomic approach.
Bioinform., 2011

Protein Packing Quality Using Delaunay Complexes.
Proceedings of the Eighth International Symposium on Voronoi Diagrams in Science and Engineering, 2011

2010
Improving protein secondary structure prediction using a simple <i>k</i>-mer model.
Bioinform., 2010

2009
SAM-T08, HMM-based protein structure prediction.
Nucleic Acids Res., 2009

Pokefind: a novel topological filter for use with protein structure prediction.
Bioinform., 2009

2008
PREDICT-2ND: a tool for generalized protein local structure prediction.
Bioinform., 2008

2005
The UCSC Kestrel Parallel Processor.
IEEE Trans. Parallel Distributed Syst., 2005

Calibrating <i>E</i>-values for hidden Markov models using reverse-sequence null models.
Bioinform., 2005

2004
SPrCY: comparison of structural predictions in the Saccharomyces cerevisiae genome.
Bioinform., 2004

2002
Classifying G-protein coupled receptors with support vector machines.
Bioinform., 2002

Predicting reliable regions in protein sequence alignments.
Bioinform., 2002

2001
Evaluation of protein multiple alignments by SAM-T99 using the BAliBASE multiple alignment test set.
Bioinform., 2001

2000
A homolog of mammalian antizyme is present in fission yeast Schizosaccharomyces pombe but not detected in budding yeast Saccharomyces cerevisiae.
Bioinform., 2000

1998
Kestrel: A Programmable Array for Sequence Analysis.
J. VLSI Signal Process., 1998

Hidden Markov models for detecting remote protein homologies.
Bioinform., 1998

1997
Scoring hidden Markov models.
Comput. Appl. Biosci., 1997

Kestrel: Design of an 8-bit SIMD Parallel Processor.
Proceedings of the 17th Conference on Advanced Research in VLSI (ARVLSI '97), 1997

1996
A Flexible Motif Search Technique Based on Generalized Profiles.
Comput. Chem., 1996

Dirichlet mixtures: a method for improved detection of weak but significant protein sequence homology.
Comput. Appl. Biosci., 1996

Kestrel: A Programmable Array for Sequence Analysis.
Proceedings of the 1996 International Conference on Application-Specific Systems, 1996

1995
Evaluating Regularizers for Estimating Distributions of Amino Acids.
Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology, 1995

1991
A semi-systolic decoder for the PDSC-73 error-correcting code.
Discret. Appl. Math., 1991

Logic Minimization using Two-column Rectangle Replacement.
Proceedings of the 28th Design Automation Conference, 1991

Amap: A Technology Mapper for Selector-Based Field-Programmable Gate Arrays.
Proceedings of the 28th Design Automation Conference, 1991

Xmap: A Technology Mapper for Table-Lookup Field-Programmable Gate Arrays.
Proceedings of the 28th Design Automation Conference, 1991

1990
Computing signal delay in general RC networks by tree/link partitioning.
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 1990

1986
Finding minimal perfect hash functions.
Proceedings of the 17th SIGCSE Technical Symposium on Computer Science Education, 1986

Getting High Performance with Slow Memory.
Proceedings of the Spring COMPCON'86, 1986

1985
Efficient hardware for multiway jumps and pre-fetches.
Proceedings of the 18th annual workshop on Microprogramming, 1985

1983
CHISEL: an extension to the programming language C for VLSI layout.
PhD thesis, 1983

1981
Optimal Wiring between Rectangles
Proceedings of the 13th Annual ACM Symposium on Theory of Computing, 1981


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