Luca Denti

According to our database, Luca Denti authored at least 13 papers between 2017 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Differential analysis of alternative splicing events in gene regions using residual neural networks.

Simone Ciccolella, Luca Denti, Jorge Avila Cartes, Gianluca Della Vedova, Yuri Pirola, Raffaella Rizzi, Paola Bonizzoni

Neural Comput. Appl., March, 2025

Pangenome Graph Indexing via the Multidollar-BWT.

Davide Cozzi, Brian Riccardi, Luca Denti, Simone Ciccolella, Kunihiko Sadakane, Paola Bonizzoni

Proceedings of the 23rd International Symposium on Experimental Algorithms, 2025

2024

PangeBlocks: customized construction of pangenome graphs via maximal blocks.

Jorge Avila Cartes, Paola Bonizzoni, Simone Ciccolella, Gianluca Della Vedova, Luca Denti

BMC Bioinform., December, 2024

Differential quantification of alternative splicing events on spliced pangenome graphs.

Simone Ciccolella, Davide Cozzi, Gianluca Della Vedova, Stephen Njuguna Kuria, Paola Bonizzoni, Luca Denti

PLoS Comput. Biol., 2024

2023

ESGq: Alternative Splicing Events Quantification across Conditions based on Event Splicing Graphs.

Davide Cozzi, Paola Bonizzoni, Luca Denti

Proceedings of the 23rd Conference Information Technologies, 2023

2021

MALVIRUS: an integrated application for viral variant analysis.

Simone Ciccolella, Luca Denti, Paola Bonizzoni, Gianluca Della Vedova, Yuri Pirola, Marco Previtali

BMC Bioinform., November, 2021

Shark: fishing relevant reads in an RNA-Seq sample.

Luca Denti, Yuri Pirola, Marco Previtali, Tamara Ceccato, Gianluca Della Vedova, Raffaella Rizzi, Paola Bonizzoni

Bioinform., 2021

Triplet-based similarity score for fully multilabeled trees with poly-occurring labels.

Simone Ciccolella, Giulia Bernardini, Luca Denti, Paola Bonizzoni, Marco Previtali, Gianluca Della Vedova

Bioinform., 2021

2020

Algorithms for analyzing genetic variability from Next-Generation Sequencing data.

Luca Denti

PhD thesis, 2020

2019

Network Properties.

Stefano Beretta, Luca Denti, Marco Previtali

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 1, 2019

Graph Theory and Definitions.

Stefano Beretta, Luca Denti, Marco Previtali

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 1, 2019

2018

ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events.

Luca Denti, Raffaella Rizzi, Stefano Beretta, Gianluca Della Vedova, Marco Previtali, Paola Bonizzoni

BMC Bioinform., 2018

2017

Mapping RNA-seq Data to a Transcript Graph via Approximate Pattern Matching to a Hypertext.

Stefano Beretta, Paola Bonizzoni, Luca Denti, Marco Previtali, Raffaella Rizzi

Proceedings of the Algorithms for Computational Biology, 2017