Maciej Antczak

Orcid: 0000-0002-5320-2023

According to our database1, Maciej Antczak authored at least 21 papers between 2014 and 2023.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

Online presence:

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Bibliography

2023
High-quality, customizable heuristics for RNA 3D structure alignment.
Bioinform., May, 2023

Machine learning for RNA 2D structure prediction benchmarked on experimental data.
Briefings Bioinform., May, 2023

2022
RNAspider: a webserver to analyze entanglements in RNA 3D structures.
Nucleic Acids Res., 2022

RNAloops: a database of RNA multiloops.
Bioinform., 2022

RNAsolo: a repository of cleaned PDB-derived RNA 3D structures.
Bioinform., 2022

2021
Brilliant Challenges Optimization Problem Submission Contest Final Report.
CoRR, 2021

2020
New models and algorithms for RNA pseudoknot order assignment.
Int. J. Appl. Math. Comput. Sci., 2020

2019
RNAvista: a webserver to assess RNA secondary structures with non-canonical base pairs.
Bioinform., 2019

2018
RNApdbee 2.0: multifunctional tool for RNA structure annotation.
Nucleic Acids Res., 2018

A Survey on Online Judge Systems and Their Applications.
ACM Comput. Surv., 2018

Evaluation as a Service architecture and crowdsourced problems solving implemented in Optil.io platform.
CoRR, 2018

RNAfitme: a webserver for modeling nucleobase and nucleoside residue conformation in fixed-backbone RNA structures.
BMC Bioinform., 2018

New algorithms to represent complex pseudoknotted RNA structures in dot-bracket notation.
Bioinform., 2018

2016
High-order statistical compressor for long-term storage of DNA sequencing data.
RAIRO Oper. Res., 2016

Structural alignment of protein descriptors - a combinatorial model.
BMC Bioinform., 2016

Optil.io: Cloud Based Platform For Solving Optimization Problems Using Crowdsourcing Approach.
Proceedings of the 19th ACM Conference on Computer Supported Cooperative Work and Social Computing, 2016

2015
RNAssess - a web server for quality assessment of RNA 3D structures.
Nucleic Acids Res., 2015

New in silico approach to assessing RNA secondary structures with non-canonical base pairs.
BMC Bioinform., 2015

Building the Library of Rna 3D Nucleotide Conformations Using the Clustering Approach.
Int. J. Appl. Math. Comput. Sci., 2015

SphereGrinder - reference structure-based tool for quality assessment of protein structural models.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014
RNApdbee - a webserver to derive secondary structures from pdb files of knotted and unknotted RNAs.
Nucleic Acids Res., 2014


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