Madalena Chaves

According to our database1, Madalena Chaves authored at least 32 papers between 2001 and 2021.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
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Bibliography

2021
Special issue "International Symposium on Molecular Logic and Computational Synthetic Biology: MLCSB18".
Soft Comput., 2021

2020
Boolean dynamics revisited through feedback interconnections.
Nat. Comput., 2020

Cell cycle period control through modulation of clock inputs.
J. Bioinform. Comput. Biol., 2020

A model of apoptosis receptor reactions to study cell fate decision.
Proceedings of the 28th Mediterranean Conference on Control and Automation, 2020

Core Models of Receptor Reactions to Evaluate Basic Pathway Designs Enabling Heterogeneous Commitments to Apoptosis.
Proceedings of the Computational Methods in Systems Biology, 2020

Qualitative Analysis of Mammalian Circadian Oscillations: Cycle Dynamics and Robustness.
Proceedings of the Computational Methods in Systems Biology, 2020

2019
Dynamics of complex feedback architectures in metabolic pathways.
Autom., 2019

rPrism - A Software for Reactive Weighted State Transition Models.
Proceedings of the Hybrid Systems Biology - 6th International Workshop, 2019

Coupling and synchronization of piecewise linear genetic regulatory systems.
Proceedings of the 58th IEEE Conference on Decision and Control, 2019

2018
A Stability Result for Periodic Solutions of Nonmonotonic Smooth Negative Feedback Systems.
SIAM J. Appl. Dyn. Syst., 2018

2016
Periodic Oscillations for Nonmonotonic Smooth Negative Feedback Circuits.
SIAM J. Appl. Dyn. Syst., 2016

2015
Attractor computation using interconnected Boolean networks: Testing growth rate models in E. Coli.
Theor. Comput. Sci., 2015

Continuous-switch piecewise quadratic models of biological networks: Application to bacterial growth.
Autom., 2015

2013
Interconnection of asynchronous Boolean networks, asymptotic and transient dynamics.
Autom., 2013

A Class of Switched Piecewise Quadratic Systems for Coupling Gene Expression with Growth Rate in Bacteria.
Proceedings of the 9th IFAC Symposium on Nonlinear Control Systems, 2013

A linear reformulation of Boolean optimization problems and structure identification of gene regulation networks.
Proceedings of the 52nd IEEE Conference on Decision and Control, 2013

Predictive analysis of dynamical systems: combining discrete and continuous formalisms.
, 2013

2012
A Simple Model to Control Growth Rate of Synthetic E. coli during the Exponential Phase: Model Analysis and Parameter Estimation.
Proceedings of the Computational Methods in Systems Biology, 2012

2011
Exact control of genetic networks in a qualitative framework: The bistable switch example.
Autom., 2011

An observer for a piecewise affine genetic network model with Boolean observations.
Proceedings of the 50th IEEE Conference on Decision and Control and European Control Conference, 2011

Predicting the asymptotic dynamics of large biological networks by interconnections of Boolean modules.
Proceedings of the 50th IEEE Conference on Decision and Control and European Control Conference, 2011

2009
Shape, Size, and Robustness: Feasible Regions in the Parameter Space of Biochemical Networks.
PLoS Comput. Biol., 2009

Live and let die - A systems biology view on cell death.
Comput. Chem. Eng., 2009

Operational interactions in genetic networks: Application to an apoptosis signalling pathway.
Proceedings of the 10th European Control Conference, 2009

Methods for qualitative analysis of genetic networks.
Proceedings of the 10th European Control Conference, 2009

2008
Bistable Biological Systems: A Characterization Through Local Compact Input-to-State Stability.
IEEE Trans. Autom. Control., 2008

2006
Exact computation of amplification for a class of nonlinear systems arising from cellular signaling pathways.
Autom., 2006

Structure and timescale analysis in genetic regulatory networks.
Proceedings of the 45th IEEE Conference on Decision and Control, 2006

Stability of Rate-Controlled Zero-Deficiency Networks.
Proceedings of the 45th IEEE Conference on Decision and Control, 2006

2005
Input-to-State Stability of Rate-Controlled Biochemical Networks.
SIAM J. Control. Optim., 2005

2002
State-estimators for Chemical Reaction Networks of Feinberg-Horn-Jackson Zero Deficiency Type.
Eur. J. Control, 2002

2001
Observers for chemical reaction networks.
Proceedings of the 6th European Control Conference, 2001


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