Marcus Oswald

According to our database1, Marcus Oswald authored at least 31 papers between 1998 and 2019.

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Bibliography

2019
Modelling TERT regulation across 19 different cancer types based on the MIPRIP 2.0 gene regulatory network approach.
BMC Bioinformatics, 2019

2014
Characterizing Protein Interactions Employing a Genome-Wide siRNA Cellular Phenotyping Screen.
PLoS Computational Biology, 2014

A branch-and-bound algorithm for the coupled task problem.
Math. Meth. of OR, 2014

Network topology-based detection of differential gene regulation and regulatory switches in cell metabolism and signaling.
BMC Systems Biology, 2014

Estimating the activity of transcription factors by the effect on their target genes.
Bioinformatics, 2014

2012
New results on the Windy Postman Problem.
Math. Program., 2012

Exact solution of the 2-dimensional grid arrangement problem.
Discret. Optim., 2012

2011
Optimal linear arrangements using betweenness variables.
Math. Program. Comput., 2011

A Branch and Cut solver for the maximum stable set problem.
J. Comb. Optim., 2011

2010
Speeding up IP-based algorithms for constrained quadratic 0-1 optimization.
Math. Program., 2010

PathWave: discovering patterns of differentially regulated enzymes in metabolic pathways.
Bioinformatics, 2010

2009
The simultaneous consecutive ones problem.
Theor. Comput. Sci., 2009

Improved analysis of an algorithm for the coupled task problem with UET jobs.
Oper. Res. Lett., 2009

Analyzing the regulation of metabolic pathways in human breast cancer.
Proceedings of the LWA 2009: Workshop-Woche: Lernen, 2009

2008
Local cuts revisited.
Oper. Res. Lett., 2008

Machine learning based analyses on metabolic networks supports high-throughput knockout screens.
BMC Systems Biology, 2008

A Basic Toolbox for Constrained Quadratic 0/1 Optimization.
Proceedings of the Experimental Algorithms, 7th International Workshop, 2008

2007
On the graphical relaxation of the symmetric traveling salesman polytope.
Math. Program., 2007

Compression of Digital Road Networks.
Proceedings of the Advances in Spatial and Temporal Databases, 2007

Optimizing in Graphs with Expensive Computation of Edge Weights.
Proceedings of the Operations Research, 2007

Integrating Genomic and Transcriptomic Data into Graph Based Approaches for Defining Essential Reactions in the Metabolic Network of Escherichia Coli.
Proceedings of the LWA 2007: Lernen - Wissen, 2007

2006
Computing Best Transition Pathways in High-Dimensional Dynamical Systems: Application to the AlphaL \leftrightharpoons Beta \leftrightharpoons AlphaR Transitions in Octaalanine.
Multiscale Modeling & Simulation, 2006

Discovering functional gene expression patterns in the metabolic network of Escherichia coli with wavelets transforms.
BMC Bioinformatics, 2006

Pattern recognition of gene expression data on biochemical networks with simple wavelet transforms.
Proceedings of the LWA 2006: Lernen - Wissensentdeckung - Adaptivität, Hildesheim, Deutschland, October 9th-11th 2006, joint workshop event of several interest groups of the German Society for Informatics (GI) - 14th Workshop on Adaptivity and User Modeling in Interactive Systems (ABIS 2006) - Workshop Information Retrieval 2006 of the Special Interest Group Information Retrieval (FGIR 2006) - Workshop on Knowledge and Experience Management (FGWM 2006), 2006

2005
Not Every GTSP Facet Induces an STSP Facet.
Proceedings of the Integer Programming and Combinatorial Optimization, 2005

2004
An exact algorithm for scheduling identical coupled tasks.
Math. Meth. of OR, 2004

Computing Optimal Consecutive Ones Matrices.
Proceedings of the Sharpest Cut, 2004

2003
The weighted consecutive ones problem for a fixed number of rows or columns.
Oper. Res. Lett., 2003

2001
Constructing New Facets of the Consecutive Ones Polytope.
Proceedings of the Combinatorial Optimization, 2001

2000
Polyhedral Aspects of the Consecutive Ones Problem.
Proceedings of the Computing and Combinatorics, 6th Annual International Conference, 2000

1998
Consecutive Ones and a Betweenness Problem in Computational Biology.
Proceedings of the Integer Programming and Combinatorial Optimization, 1998


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