Rainer König

Orcid: 0000-0001-6691-3804

According to our database1, Rainer König authored at least 35 papers between 1980 and 2022.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
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Links

On csauthors.net:

Bibliography

2022
Linear programming based gene expression model (LPM-GEM) predicts the carbon source for Bacillus subtilis.
BMC Bioinform., 2022

2021
Evaluating the effects of automation components in service networks of rail freight.
J. Rail Transp. Plan. Manag., 2021

2020
Reprogramming of macrophages employing gene regulatory and metabolic network models.
PLoS Comput. Biol., 2020

2019
Modelling TERT regulation across 19 different cancer types based on the MIPRIP 2.0 gene regulatory network approach.
BMC Bioinform., 2019

2017
Segmentation of cell structures using Model-Based Set Covering with iterative reweighting.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

2016
The Use of Tools, Modelling Methods, Data Types, and Endpoints in Systems Medicine: A Survey on Projects of the German e: Med-Programme.
Proceedings of the Exploring Complexity in Health: An Interdisciplinary Systems Approach - Proceedings of MIE2016 at HEC2016, Munich, Germany, 28 August, 2016

2014
Characterizing Protein Interactions Employing a Genome-Wide siRNA Cellular Phenotyping Screen.
PLoS Comput. Biol., 2014

Network topology-based detection of differential gene regulation and regulatory switches in cell metabolism and signaling.
BMC Syst. Biol., 2014

Estimating the activity of transcription factors by the effect on their target genes.
Bioinform., 2014

2013
Disease-gene discovery by integration of 3D gene expression and transcription factor binding affinities.
Bioinform., 2013

SplicingCompass: differential splicing detection using RNA-Seq data.
Bioinform., 2013

2012
Cell Tracking for Automatic Migration and Proliferation Analysis in High-Throughput Screens.
Proceedings of the Bildverarbeitung für die Medizin 2012 - Algorithmen - Systeme, 2012

2011
RIP: the regulatory interaction predictor - a machine learning-based approach for predicting target genes of transcription factors.
Bioinform., 2011

2010
Regulation patterns in signaling networks of cancer.
BMC Syst. Biol., 2010

Identifying essential genes in bacterial metabolic networks with machine learning methods.
BMC Syst. Biol., 2010

Detecting host factors involved in virus infection by observing the clustering of infected cells in siRNA screening images.
Bioinform., 2010

PathWave: discovering patterns of differentially regulated enzymes in metabolic pathways.
Bioinform., 2010

2009
Analyzing the regulation of metabolic pathways in human breast cancer.
Proceedings of the LWA 2009: Workshop-Woche: Lernen, 2009

Haralick's Texture Features Computation Accelerated by GPUs for Biological Applications.
Proceedings of the Modeling, 2009

2008
Machine learning based analyses on metabolic networks supports high-throughput knockout screens.
BMC Syst. Biol., 2008

2007
Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation of <i>Escherichia coli</i>.
BMC Bioinform., 2007

Integrating Genomic and Transcriptomic Data into Graph Based Approaches for Defining Essential Reactions in the Metabolic Network of Escherichia Coli.
Proceedings of the LWA 2007: Lernen - Wissen, 2007

2006
GOPET: A tool for automated predictions of Gene Ontology terms.
BMC Bioinform., 2006

Discovering functional gene expression patterns in the metabolic network of <i>Escherichia coli </i>with wavelets transforms.
BMC Bioinform., 2006

Pattern recognition of gene expression data on biochemical networks with simple wavelet transforms.
Proceedings of the LWA 2006: Lernen - Wissensentdeckung - Adaptivität, Hildesheim, Deutschland, October 9th-11th 2006, joint workshop event of several interest groups of the German Society for Informatics (GI) - 14th Workshop on Adaptivity and User Modeling in Interactive Systems (ABIS 2006) - Workshop Information Retrieval 2006 of the Special Interest Group Information Retrieval (FGIR 2006) - Workshop on Knowledge and Experience Management (FGWM 2006), 2006

2004
Applying Support Vector Machines for Gene ontology based gene function prediction.
BMC Bioinform., 2004

Gene expression analysis on biochemical networks using the Potts spin model.
Bioinform., 2004

2003
Gene expression analysis on biochemical networks with the potts spin model.
Proceedings of the German Conference on Bioinformatics, 2003

2002
Modelling of Information Flows in Cells.
Proceedings of the 16<sup>th</sup> European Simulation Multiconference: Modelling and Simulation 2002, 2002

1999
Media Oriented Systems Transport (MOST®) - Standard für Multimedia Networking im Fahrzeug / Media Oriented Systems Transport - Standard for Multimedia Networking in Vehicle Environment.
Informationstechnik Tech. Inform., 1999

1993
A Prototype of an Interface Bilder for the Common Lisp Interface Manager - CLIB.
ACM SIGPLAN Notices, 1993

1992
Informationstechnik für den Verkehr - Medizin oder Droge?
Proceedings of the Informatik cui bono? GI-FB 8 Fachtagung, 1992

1991
Möglichkeiten und Grenzen von "Cooperative Work".
Proceedings of the Telekommunikation und multimediale Anwendungen der Informatik, 1991

1990
Chancen des Einsatzes öffentlicher Datennetze bei der umweltverträglichen Steuerung des Personennahverkehrs.
Proceedings of the Informatik für den Umweltschutz, 1990

1980
Petri-Netze und ihre Verwendung zum standardisierten Entwurf digitaler Steuerungen.
PhD thesis, 1980


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