Matthew L. Jenior

According to our database, Matthew L. Jenior authored at least 6 papers between 2020 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Identifying metabolic adaptations characteristic of cardiotoxicity using paired transcriptomics and metabolomics data integrated with a computational model of heart metabolism.

Bonnie V. Dougherty, Connor J. Moore, Kristopher D. Rawls, Matthew L. Jenior, Bryan Chun, Sarbajeet Nagdas, Jeffrey J. Saucerman, Glynis L. Kolling, Anders Wallqvist, Jason A. Papin

PLoS Comput. Biol., February, 2024

2023

Network analysis of toxin production in Clostridioides difficile identifies key metabolic dependencies.

Deborah A. Powers, Matthew L. Jenior, Glynis L. Kolling, Jason A. Papin

PLoS Comput. Biol., 2023

Reconstructor: a COBRApy compatible tool for automated genome-scale metabolic network reconstruction with parsimonious flux-based gap-filling.

Matthew L. Jenior, Emma M. Glass, Jason A. Papin

Bioinform., 2023

2022

Quantifying cumulative phenotypic and genomic evidence for procedural generation of metabolic network reconstructions.

Thomas J. Moutinho Jr., Benjamin C. Neubert, Matthew L. Jenior, Jason A. Papin

PLoS Comput. Biol., 2022

2020

Transcriptome-guided parsimonious flux analysis improves predictions with metabolic networks in complex environments.

Matthew L. Jenior, Thomas J. Moutinho Jr., Bonnie V. Dougherty, Jason A. Papin

PLoS Comput. Biol., 2020

Ten simple rules to increase computational skills among biologists with Code Clubs.

Ada K. Hagan, Nicholas A. Lesniak, Marcy J. Balunas, Lucas Bishop, William L. Close, Matthew D. Doherty, Amanda G. Elmore, Kaitlin J. Flynn, Geoffrey D. Hannigan, Charlie C. Koumpouras, Matthew L. Jenior, Ariangela J. Kozik, Kathryn McBride, Samara B. Rifkin, Joshua M. A. Stough, Kelly L. Sovacool, Marc A. Sze, Sarah Tomkovich, Begüm D. Topçuoglu, Patrick D. Schloss

PLoS Comput. Biol., 2020