Mazen Ahmad

According to our database, Mazen Ahmad authored at least 8 papers between 2014 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

Improved estimation of intrinsic solubility of drug-like molecules through multi-task graph transformer.

Jiaxi Zhao, Eline Hermans, Kia Sepassi, Christophe Tistaert, Christel A. S. Bergström, Mazen Ahmad, Per Larsson

J. Cheminformatics, December, 2025

C2PO: an ML-powered optimizer of the membrane permeability of cyclic peptides through chemical modification.

Roy Aerts, Joris Tavernier, Alan Kerstjens, Mazen Ahmad, José Carlos Gómez-Tamayo, Gary Tresadern, Hans De Winter

J. Cheminformatics, December, 2025

REINFORCE-ING Chemical Language Models for Drug Discovery.

Morgan C. Thomas, Albert Bou, José Carlos Gómez-Tamayo, Gary Tresadern, Mazen Ahmad, Gianni De Fabritiis

J. Chem. Inf. Model., 2025

MolAgent: Biomolecular Property Estimation in the Agentic Era.

José Carlos Gómez-Tamayo, Joris Tavernier, Roy Aerts, Natalia Dyubankova, Dries Van Rompaey, Sairam Menon, Marvin N. Steijaert, Jörg Kurt Wegner, Hugo Ceulemans, Gary Tresadern, Hans De Winter, Mazen Ahmad

J. Chem. Inf. Model., 2025

2024

PromptSMILES: prompting for scaffold decoration and fragment linking in chemical language models.

Morgan C. Thomas, Mazen Ahmad, Gary Tresadern, Gianni De Fabritiis

J. Cheminformatics, December, 2024

ACEGEN: Reinforcement Learning of Generative Chemical Agents for Drug Discovery.

Albert Bou, Morgan C. Thomas, Sebastian Dittert, Carles Navarro, Maciej Majewski, Ye Wang, Shivam Patel, Gary Tresadern, Mazen Ahmad, Vincent Moens, Woody Sherman, Simone Sciabola, Gianni De Fabritiis

J. Chem. Inf. Model., 2024

2021

A geometric deep learning approach to predict binding conformations of bioactive molecules.

Oscar Méndez-Lucio, Mazen Ahmad, Ehecatl Antonio del Rio-Chanona, Jörg Kurt Wegner

Nat. Mach. Intell., 2021

2014

Entropy gain due to water release upon ligand binding.

Mazen Ahmad, Olga V. Kalinina, Thomas Lengauer

J. Cheminformatics, 2014