Mercè Llabrés

According to our database, Mercè Llabrés authored at least 36 papers between 1997 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Analysing the Expressiveness of Metabolic Networks Representations.

Irene García, Bessem Chouaia, Mercè Llabrés, Pere Palmer-Rodríguez, Marta Simeoni

Proceedings of the Artificial Life and Evolutionary Computation, 2023

2021

The Generalized Robinson-Foulds Distance for Phylogenetic Trees.

Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

J. Comput. Biol., 2021

VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families.

Joan Carles Pons, David Páez-Espino, Gabriel Riera, Natalia Ivanova, Nikos Kyrpides, Mercè Llabrés

Bioinform., 2021

2020

Alignment of biological networks by integer linear programming: virus-host protein-protein interaction networks.

Mercè Llabrés, Gabriel Riera, Francesc Rosselló, Gabriel Valiente

BMC Bioinform., 2020

AligNet: alignment of protein-protein interaction networks.

Adrià Alcalà, Ricardo Alberich, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

BMC Bioinform., 2020

An update on the Symbiotic Genomes Database (SymGenDB): a collection of metadata, genomic, genetic and protein sequences, orthologs and metabolic networks of symbiotic organisms.

Mariana Reyes-Prieto, Carlos Vargas-Chávez, Mercè Llabrés, Pere Palmer, Amparo Latorre, Andrés Moya

Database J. Biol. Databases Curation, 2020

A Generalized Robinson-Foulds Distance for Clonal Trees, Mutation Trees, and Phylogenetic Trees and Networks.

Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020

2019

IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes.

David Páez-Espino, Simon Roux, I-Min A. Chen, Krishna Palaniappan, Anna Ratner, Ken Chu, Marcel Huntemann, T. B. K. Reddy, Joan Carles Pons, Mercè Llabrés, Emiley A. Eloe-Fadrosh, Natalia N. Ivanova, Nikos Kyrpides

Nucleic Acids Res., 2019

2014

Tree-Child Cluster Networks.

Adrià Alcalà, Mercè Llabrés, Francesc Rosselló, Pau Rullan

Fundam. Informaticae, 2014

MP-Align: alignment of metabolic pathways.

Ricardo Alberich, Mercè Llabrés, David Sánchez, Marta Simeoni, Marc Tuduri

BMC Syst. Biol., 2014

2011

Comparison of Galled Trees.

Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

2010

Path lengths in tree-child time consistent hybridization networks.

Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

Inf. Sci., 2010

Two Results on Distances for Phylogenetic Networks.

Gabriel Cardona, Mercè Llabrés, Francesc Rosselló

Proceedings of the Advances in Bioinformatics, 2010

2009

On Nakhleh's Metric for Reduced Phylogenetic Networks.

Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

IEEE ACM Trans. Comput. Biol. Bioinform., 2009

Metrics for Phylogenetic Networks II: Nodal and Triplets Metrics.

Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

IEEE ACM Trans. Comput. Biol. Bioinform., 2009

Metrics for Phylogenetic Networks I: Generalizations of the Robinson-Foulds Metric.

Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

IEEE ACM Trans. Comput. Biol. Bioinform., 2009

The comparison of tree-sibling time consistent phylogenetic networks is graph isomorphism-complete

Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

CoRR, 2009

2008

A Distance Metric for Tree-Sibling Time Consistent Phylogenetic Networks

Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

CoRR, 2008

Nodal distances for rooted phylogenetic trees.

Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

CoRR, 2008

A distance metric for a class of tree-sibling phylogenetic networks.

Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

Bioinform., 2008

2005

The uniqueness condition for the double pushout transformation of algebras.

Mercè Llabrés, Francesc Rosselló

Inf. Sci., 2005

On the Ancestral Compatibility of Two Phylogenetic Trees with Nested Taxa

Mercè Llabrés, Jairo Rocha, Francesc Rosselló, Gabriel Valiente

CoRR, 2005

A family of metrics for biopolymers based on counting independent sets.

Jairo Rocha, Mercè Llabrés, Ricardo Alberich

Comput. Biol. Chem., 2005

2004

Single-Pushout Transformation Of Total Algebras.

Ricardo Alberich, Mercè Llabrés, Francesc Rosselló

Int. J. Found. Comput. Sci., 2004

A new family of metrics for biopolymer contact structures.

Mercè Llabrés, Francesc Rosselló

Comput. Biol. Chem., 2004

Ordering BAC Clones from Fingerprint Data obtained through Four Enzymes Digestion and Fluorescent Labeling.

Giulio Marcon, Nicola Cannata, Mercè Llabrés, Marta Simeoni, Giorgio Valle

Proceedings of the 5th Annual Spanish Bioinformatics Conference, Barcelona, Catalonia, 2004

On Supertrees of Phylogenetic Trees.

Mercè Llabrés, Francesc Rosselló, Gabriel Valiente

Proceedings of the 5th Annual Spanish Bioinformatics Conference, Barcelona, Catalonia, 2004

2003

A family of metrics on contact structures based on edge ideals

Mercè Llabrés, Francesc Rosselló

CoRR, 2003

Modelling Biochemical Operations on RNA Secondary Structures

Mercè Llabrés, Francesc Rosselló

CoRR, 2003

2002

Concurrency and Loose Semantics of Open Graph Transformation Systems.

Reiko Heckel, Mercè Llabrés, Hartmut Ehrig, Fernando Orejas

Math. Struct. Comput. Sci., 2002

Pushout Complements for Partly Total Algebras.

Peter Burmeister, Mercè Llabrés, Francesc Rosselló

Math. Struct. Comput. Sci., 2002

2001

Towards a Double Pushout Transformation of Algebras.

Mercè Llabrés, Francesc Rosselló

Proceedings of the GETGRATS Closing Workshop 2001, Bordeaux, France, June 22-23, 2001, 2001

1999

A Bi-Categorical Axiomatisation of Concurrent Graph Rewriting.

Fabio Gadducci, Reiko Heckel, Mercè Llabrés

Proceedings of the Conference on Category Theory and Computer Science, 1999

1998

Pushout Complements for Arbitrary Partial Algebras.

Mercè Llabrés, Francesc Rosselló

Proceedings of the Theory and Application of Graph Transformations, 1998

Double-Pullback Graph Transitions: A Rule-Based Framework with Incomplete Information.

Hartmut Ehrig, Reiko Heckel, Mercè Llabrés, Fernando Orejas, Julia Padberg, Grzegorz Rozenberg

Proceedings of the Theory and Application of Graph Transformations, 1998

1997

Double-Pushout Hypergraph Rewriting Using Total Conformisms.

Mercè Llabrés, Francesc Rosselló

Fundam. Informaticae, 1997