Michal Marczyk

According to our database, Michal Marczyk authored at least 28 papers between 2011 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2023

Pathological changes or technical artefacts? The problem of the heterogenous databases in COVID-19 CXR image analysis.

Marek Socha, Wojciech Prazuch, Aleksandra Suwalska, Pawel Foszner, Joanna Tobiasz, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Mateusz Nowak, Barbara Gizycka, Gabriela Zapolska, Tadeusz Popiela, Grzegorz Przybylski, Piotr Fiedor, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Jerzy Walecki, Andrzej Cieszanowski, Edyta Szurowska, Michal Marczyk, Joanna Polanska

Comput. Methods Programs Biomed., October, 2023

Combining low-dose CT-based radiomics and metabolomics for early lung cancer screening support.

Joanna Zyla, Michal Marczyk, Wojciech Prazuch, Marek Socha, Aleksandra Suwalska, Agata Durawa, Malgorzata Jelitto-Górska, Katarzyna Dziadziuszko, Edyta Szurowska, Witold Rzyman, Piotr Widlak, Joanna Polanska

CoRR, 2023

BRONCO: Automated modelling of the bronchovascular bundle using the Computed Tomography Images.

Wojciech Prazuch, Marek Socha, Anna Mrukwa, Aleksandra Suwalska, Agata Durawa, Malgorzata Jelitto-Górska, Katarzyna Dziadziuszko, Edyta Szurowska, Pawel Bozek, Michal Marczyk, Witold Rzyman, Joanna Polanska

CoRR, 2023

2022

POLCOVID: a multicenter multiclass chest X-ray database (Poland, 2020-2021).

Aleksandra Suwalska, Joanna Tobiasz, Wojciech Prazuch, Marek Socha, Pawel Foszner, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Jerzy Walecki, Tadeusz Popiela, Grzegorz Przybylski, Mateusz Nowak, Piotr Fiedor, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Gabriela Zapolska, Barbara Gizycka, Edyta Szurowska, Michal Marczyk, Andrzej Cieszanowski, Joanna Polanska

CoRR, 2022

CIRCA: comprehensible online system in support of chest X-rays-based COVID-19 diagnosis.

Wojciech Prazuch, Aleksandra Suwalska, Marek Socha, Joanna Tobiasz, Pawel Foszner, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Jerzy Walecki, Tadeusz Popiela, Grzegorz Przybylski, Andrzej Cieszanowski, Mateusz Nowak, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Gabriela Zapolska, Barbara Gizycka, Edyta Szurowska, Michal Marczyk, Joanna Polanska

CoRR, 2022

Investigating Sources of Zeros in 10× Single-Cell RNAseq Data.

Hanna Slowik, Joanna Zyla, Michal Marczyk

Proceedings of the Bioinformatics and Biomedical Engineering, 2022

Finding Significantly Enriched Cells in Single-Cell RNA Sequencing by Single-Sample Approaches.

Anna Mrukwa, Michal Marczyk, Joanna Zyla

Proceedings of the Bioinformatics and Biomedical Engineering, 2022

2021

Autoencoder-based bone removal algorithm from x-ray images of the lung.

Seweryn Kalisz, Michal Marczyk

Proceedings of the 21st IEEE International Conference on Bioinformatics and Bioengineering, 2021

2020

GaMRed - Adaptive Filtering of High-Throughput Biological Data.

Michal Marczyk, Roman Jaksik, Andrzej Polanski, Joanna Polanska

IEEE ACM Trans. Comput. Biol. Bioinform., 2020

2019

Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms.

Joanna Zyla, Michal Marczyk, Teresa Domaszewska, Stefan H. E. Kaufmann, Joanna Polanska, January 3rd Weiner

Bioinform., 2019

BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm.

Anna Papiez, Michal Marczyk, Joanna Polanska, Andrzej Polanski

Bioinform., 2019

2017

Ranking metrics in gene set enrichment analysis: do they matter?

Joanna Zyla, Michal Marczyk, January 3rd Weiner, Joanna Polanska

BMC Bioinform., 2017

Reproducibility of Finding Enriched Gene Sets in Biological Data Analysis.

Joanna Zyla, Michal Marczyk, Joanna Polanska

Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

Processing 2D Gel Electrophoresis Images for Efficient Gaussian Mixture Modeling.

Michal Marczyk

Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

Improving peak detection by Gaussian mixture modeling of mass spectral signal.

Michal Marczyk, Joanna Polanska, Andrzej Polanski

Proceedings of the 3rd International Conference on Frontiers of Signal Processing, 2017

2016

Sensitivity, Specificity and Prioritization of Gene Set Analysis When Applying Different Ranking Metrics.

Joanna Zyla, Michal Marczyk, Joanna Polanska

Proceedings of the 10th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2016

Improved Detection of 2D Gel Electrophoresis Spots by Using Gaussian Mixture Model.

Michal Marczyk

Proceedings of the Bioinformatics Research and Applications - 12th International Symposium, 2016

2015

Mixture Model Based Efficient Method for Magnetic Resonance Spectra Quantification.

Franciszek Binczyk, Michal Marczyk, Joanna Polanska

Proceedings of the Bioinformatics and Biomedical Engineering, 2015

Modeling of Imaging Mass Spectrometry Data and Testing by Permutation for Biomarkers Discovery in Tissues.

Michal Marczyk, Grzegorz Drazek, Monika Pietrowska, Piotr Widlak, Joanna Polanska, Andrzej Polanski

Proceedings of the International Conference on Computational Science, 2015

2014

An Efficient Algorithm for Microarray Probes Re-annotation.

Pawel Foszner, Aleksandra Gruca, Andrzej Polanski, Michal Marczyk, Roman Jaksik, Joanna Polanska

Trans. Comput. Collect. Intell., 2014

Sources of High Variance between Probe Signals in Affymetrix Short Oligonucleotide Microarrays.

Roman Jaksik, Michal Marczyk, Joanna Polanska, Joanna Rzeszowska-Wolny

Sensors, 2014

Automatic detection of outlying microarrays using multi-array quality metrics.

Michal Marczyk, Lukasz Krol, Joanna Polanska

Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2014

Methods for Quality Control of Low-resolution MALDI-ToF Spectra.

Michal Marczyk, Joanna Polanska

Proceedings of the BIOINFORMATICS 2014, 2014

A Note on Strong Causal Closedness and Completability of Classical Probability Spaces.

Michal Marczyk, Leszek Wronski

Proceedings of the New Directions in the Philosophy of Science, 2014

2013

Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition.

Michal Marczyk, Roman Jaksik, Andrzej Polanski, Joanna Polanska

BMC Bioinform., 2013

Comparison of Algorithms for Profile-Based Alignment of Low Resolution MALDI-ToF Spectra.

Michal Marczyk, Joanna Polanska, Andrzej Polanski

Proceedings of the Man-Machine Interactions 3, 2013

2011

Evaluation of available protein mass spectra pre-processing algorithms.

Michal Marczyk

Bio Algorithms Med Syst., 2011

Efficient Algorithm for Microarray Probes Re-annotation.

Pawel Foszner, Aleksandra Gruca, Andrzej Polanski, Michal Marczyk, Roman Jaksik, Joanna Polanska

Proceedings of the Computational Collective Intelligence. Technologies and Applications, 2011