Minzhu Xie

Orcid: 0000-0002-8962-093X

According to our database1, Minzhu Xie authored at least 40 papers between 2007 and 2025.

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Bibliography

2025
IBBA: an improved binary bat algorithm for solving low and high-dimensional feature selection problems.
Int. J. Mach. Learn. Cybern., September, 2025

CFRA-Net: Fusing coarse-to-fine refinement and reverse attention for lesion segmentation in medical images.
Biomed. Signal Process. Control., 2025

Drug-Target Interaction Prediction via Substructure Similarity-Guided Denoising and Hierarchical Feature Fusion.
Proceedings of the Bioinformatics Research and Applications - 21st International Symposium, 2025

scGECA: A Graph Embedded Representation Learning Approach with Dynamic Attention Mechanism for Single-Cell Clustering.
Proceedings of the Advanced Intelligent Computing Technology and Applications, 2025

MIXA-DRP: Multi-modal Integration with Cross-Attention for Anticancer Drug Response Prediction.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2025

GPK-DSP: A Graph-Based Method Integrating Prior Knowledge and Critical Gene Interactions for Anticancer Drug Sensitivity Prediction.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2025

2024
DrugDoctor: enhancing drug recommendation in cold-start scenario via visit-level representation learning and training.
Briefings Bioinform., November, 2024

Polypharmacy side effect prediction based on semi-implicit graph variational auto-encoder.
J. Bioinform. Comput. Biol., August, 2024

Subtype-MGTP: a cancer subtype identification framework based on multi-omics translation.
Bioinform., 2024

A Multi-task learning model with low-level feature sharing and inter-feature guidance for segmentation and classification of medical images.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

EPI-RMDL: Prediction of Enhancer-Promoter Interactions Based on RoFormer Mechanism and Deep Learning.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

2023
Graph regularized non-negative matrix factorization with L<sub>2,1</sub> norm regularization terms for drug-target interactions prediction.
BMC Bioinform., December, 2023

Subtype-DCGCN: an unsupervised approach for cancer subtype diagnosis based on multi-omics data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022
Graph regularized non-negative matrix factorization with prior knowledge consistency constraint for drug-target interactions prediction.
BMC Bioinform., December, 2022

Drug response prediction using graph representation learning and Laplacian feature selection.
BMC Bioinform., 2022

NNDSVD-GRMF: A Graph Dual Regularization Matrix Factorization Method Using Non-Negative Initialization for Predicting Drug-Target Interactions.
IEEE Access, 2022

2021
A novel essential protein identification method based on PPI networks and gene expression data.
BMC Bioinform., 2021

DeepLPI: a multimodal deep learning method for predicting the interactions between lncRNAs and protein isoforms.
BMC Bioinform., 2021

Proteoform characterization based on top-down mass spectrometry.
Briefings Bioinform., 2021

Overview of Machine Learning Methods for Genome-Wide Association Analysis.
Proceedings of the BIBE 2021: The Fifth International Conference on Biological Information and Biomedical Engineering, 2021

2020
Quantifying functional impact of non-coding variants with multi-task Bayesian neural network.
Bioinform., 2020

2019
DIMDRP: A Double Iteration Method for Drug Response Prediction.
IEEE Access, 2019

2017
Iteration method for detecting disease genes in terms of the integration of the cellular compartment information with the protein-protein interaction data.
Int. J. Data Min. Bioinform., 2017

2016
Identification of essential proteins via the network topology feature and subcellular localisation.
Int. J. Data Min. Bioinform., 2016

H-PoP and H-PoPG: heuristic partitioning algorithms for single individual haplotyping of polyploids.
Bioinform., 2016

2015
LGH: A Fast and Accurate Algorithm for Single Individual Haplotyping Based on a Two-Locus Linkage Graph.
IEEE ACM Trans. Comput. Biol. Bioinform., 2015

Searching High-Order SNP Combinations for Complex Diseases Based on Energy Distribution Difference.
IEEE ACM Trans. Comput. Biol. Bioinform., 2015

2013
Parameterised algorithms of the individual haplotyping problem with gaps.
Int. J. Bioinform. Res. Appl., 2013

A parameterized enumeration algorithm for the haplotype assembly problem.
Proceedings of the 6th International Conference on Biomedical Engineering and Informatics, 2013

2012
A fast and accurate algorithm for single individual haplotyping.
BMC Syst. Biol., 2012

Detecting genome-wide epistases based on the clustering of relatively frequent items.
Bioinform., 2012

2010
A practical parameterised algorithm for the individual haplotyping problem MLF.
Math. Struct. Comput. Sci., 2010

Accurate HLA type inference using a weighted similarity graph.
BMC Bioinform., 2010

2008
An Improved (and Practical) Parameterized Algorithm for the Individual Haplotyping Problem MFR with Mate-Pairs.
Algorithmica, 2008

A Practical Parameterized Algorithm for the Individual Haplotyping Problem MLF.
Proceedings of the Theory and Applications of Models of Computation, 2008

A model of higher accuracy for the individual haplotyping problem based on weighted SNP fragments and genotype with errors.
Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008

A Practical Parameterized Algorithm for Weighted Minimum Letter Flips Model of the Individual Haplotyping Problem.
Proceedings of the Frontiers in Algorithmics, Second Annual International Workshop, 2008

A Practical Exact Algorithm for the Individual Haplotyping Problem MEC/GI.
Proceedings of the Computing and Combinatorics, 14th Annual International Conference, 2008

A Practical Exact Algorithm for the Individual Haplotyping Problem MEC.
Proceedings of the 2008 International Conference on BioMedical Engineering and Informatics, 2008

2007
Research on Parameterized Algorithms of the Individual Haplotyping Problem.
J. Bioinform. Comput. Biol., 2007


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