Alex Zelikovsky
Orcid: 0000-0003-4424-4691Affiliations:
- Georgia State University, Department of Computer Science
According to our database1,
Alex Zelikovsky
authored at least 233 papers
between 1993 and 2023.
Collaborative distances:
Collaborative distances:
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Online presence:
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on zbmath.org
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on orcid.org
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on id.loc.gov
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on d-nb.info
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on dl.acm.org
On csauthors.net:
Bibliography
2023
J. Comput. Biol., September, 2023
<i>Special Issue, Part I</i> 18th International Symposium on Bioinformatics Research and Applications (ISBRA 2022).
J. Comput. Biol., August, 2023
Identifying Biomarkers Using Support Vector Machine to Understand the Racial Disparity in Triple-Negative Breast Cancer.
J. Comput. Biol., April, 2023
Special Issue: 11th International Computational Advances in Bio and Medical Sciences (ICCABS 2021).
J. Comput. Biol., April, 2023
IEEE ACM Trans. Comput. Biol. Bioinform., 2023
Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023
Deep Learning Reveals Biological Basis of Racial Disparities in Quadruple-Negative Breast Cancer.
Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023
Exploring Racial Disparities in Triple-Negative Breast Cancer: Insights from Feature Selection Algorithms.
Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023
Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023
Proceedings of the Bioinformatics Research and Applications - 19th International Symposium, 2023
2022
Computational Approaches to Detect Illicit Drug Ads and Find Vendor Communities Within Social Media Platforms.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022
17th International Symposium on Bioinformatics Research and Applications (ISBRA 2021).
J. Comput. Biol., 2022
Proceedings of the Bioinformatics Research and Applications - 18th International Symposium, 2022
2021
Pipeline for Analyzing Activity of Metabolic Pathways in Planktonic Communities Using Metatranscriptomic Data.
J. Comput. Biol., 2021
J. Comput. Biol., 2021
J. Comput. Biol., 2021
Special Issue: 9th International Computational Advances in Bio and Medical Sciences (ICCABS 2019).
J. Comput. Biol., 2021
Special Issue: 10th International Computational Advances in Bio and Medical Sciences (ICCABS 2020).
J. Comput. Biol., 2021
Special Issue: 16th International Symposium on Bioinformatics Research and Applications (ISBRA 2020).
J. Comput. Biol., 2021
Epidemiological data analysis of viral quasispecies in the next-generation sequencing era.
Briefings Bioinform., 2021
Proceedings of the Bioinformatics Research and Applications - 17th International Symposium, 2021
An SVM Based Approach to Study the Racial Disparity in Triple-Negative Breast Cancer.
Proceedings of the Computational Advances in Bio and Medical Sciences: 11th International Conference, 2021
2020
PLoS Comput. Biol., 2020
Preface Special Issue: 15th International Symposium on Bioinformatics Research and Applications (ISBRA 2019).
J. Comput. Biol., 2020
Estimating Enzyme Participation in Metabolic Pathways for Microbial Communities from RNA-seq Data.
Proceedings of the Bioinformatics Research and Applications - 16th International Symposium, 2020
Proceedings of the Computational Advances in Bio and Medical Sciences, 2020
Benchmarking of computational error-correction methods for next-generation sequencing data.
Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020
2019
Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications.
IEEE ACM Trans. Comput. Biol. Bioinform., 2019
Preface: 14th International Symposium on Bioinformatics Research and Applications (ISBRA 2018).
J. Comput. Biol., 2019
Inference of clonal selection in cancer populations using single-cell sequencing data.
Bioinform., 2019
Proceedings of the Bioinformatics Research and Applications - 15th International Symposium, 2019
Proceedings of the 10th ACM International Conference on Bioinformatics, 2019
2018
<i>Special Issue</i>Preface: 13th International Symposium on BioinformaticsResearch and Applications (ISBRA 2017).
J. Comput. Biol., 2018
Fast estimation of genetic relatedness between members of heterogeneous populations of closely related genomic variants.
BMC Bioinform., 2018
QUENTIN: reconstruction of disease transmissions from viral quasispecies genomic data.
Bioinform., 2018
Proceedings of the Bioinformatics Research and Applications - 14th International Symposium, 2018
A study of optimal cost-skew tradeoff and remaining suboptimality in interconnect tree constructions.
Proceedings of the 20th System Level Interconnect Prediction Workshop, 2018
ACM-BCB 2018 Computational Advances in Molecular Epidemiology (CAME) Chairs' Welcome.
Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018
QoS Multimedia Multicast Routing.
Proceedings of the Handbook of Approximation Algorithms and Metaheuristics, 2018
Proceedings of the Handbook of Approximation Algorithms and Metaheuristics, 2018
2017
Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications.
IEEE ACM Trans. Comput. Biol. Bioinform., 2017
Long Single-Molecule Reads Can Resolve the Complexity of the Influenza Virus Composed of Rare, Closely Related Mutant Variants.
J. Comput. Biol., 2017
Identification of cancer-specific motifs in mimotope profiles of serum antibody repertoire.
BMC Bioinform., 2017
Fast bootstrapping-based estimation of confidence intervals of expression levels and differential expression from RNA-Seq data.
Bioinform., 2017
Proceedings of the Bioinformatics Research and Applications - 13th International Symposium, 2017
Modeling the Spread of HIV and HCV Infections Based on Identification and Characterization of High-Risk Communities Using Social Media.
Proceedings of the Bioinformatics Research and Applications - 13th International Symposium, 2017
Proceedings of the Bioinformatics Research and Applications - 13th International Symposium, 2017
Efficient filtering algorithm for detection of genetic similarity between large genomic datasets.
Proceedings of the 7th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2017
Assessment of HCV infection stage as recent or chronic using multi-parameter analysis and machine learning.
Proceedings of the 7th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2017
Proceedings of the 7th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2017
Proceedings of the 8th ACM International Conference on Bioinformatics, 2017
2016
HapIso: An Accurate Method for the Haplotype-Specific Isoforms Reconstruction from Long Single-Molecule Reads.
Proceedings of the Bioinformatics Research and Applications - 12th International Symposium, 2016
2015
Searching High-Order SNP Combinations for Complex Diseases Based on Energy Distribution Difference.
IEEE ACM Trans. Comput. Biol. Bioinform., 2015
Computational framework for next-generation sequencing of heterogeneous viral populations using combinatorial pooling.
Bioinform., 2015
Proceedings of the 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2015
Algorithms for prediction of viral transmission using analysis of intra-host viral populations.
Proceedings of the 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2015
Identification of cancer-specific motifs in mimotope profiles of serum antibody repertoire.
Proceedings of the 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2015
Proceedings of the 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2015
2014
Detection of genetic relatedness between viral samples using EM-based clustering of next-generation sequencing data.
Proceedings of the IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, 2014
Proceedings of the IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, 2014
Proceedings of the IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, 2014
Proceedings of the IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, 2014
Proceedings of the IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, 2014
2013
Guest Editors' introduction to the special section on bioinformatics research and applications.
IEEE ACM Trans. Comput. Biol. Bioinform., 2013
Int. J. Netw. Comput., 2013
Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows.
BMC Bioinform., 2013
Proceedings of the Bioinformatics Research and Applications, 9th International Symposium, 2013
Optimizing pooling strategies for the massive next-generation sequencing of viral samples.
Proceedings of the IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, 2013
Proceedings of the IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, 2013
Proceedings of the IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, 2013
Proceedings of the IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, 2013
Proceedings of the IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, 2013
Proceedings of the IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, 2013
2012
Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications.
IEEE ACM Trans. Comput. Biol. Bioinform., 2012
Improved transcriptome quantification and reconstruction from RNA-Seq reads using partial annotations.
Silico Biol., 2012
BMC Bioinform., 2012
BMC Bioinform., 2012
Workshop: Bioinformatics methods for reconstruction of Infectious Bronchitis Virus quasispecies from next generation sequencing data.
Proceedings of the IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, 2012
Workshop: Novel transcript reconstruction from paired-end RNA-Seq reads using fragment length distribution.
Proceedings of the IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, 2012
Proceedings of the IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, 2012
Poster: Accurate scaffolding of large genomes using integer programming and Non-Serial Dynamic Programming.
Proceedings of the IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, 2012
Proceedings of the ACM International Conference on Bioinformatics, 2012
2011
Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications.
IEEE ACM Trans. Comput. Biol. Bioinform., 2011
Combinatorial Optimization Algorithms for Metabolic Networks Alignments and Their Applications.
Int. J. Knowl. Discov. Bioinform., 2011
BMC Bioinform., 2011
Algorithms Mol. Biol., 2011
Proceedings of the Algorithms in Bioinformatics - 11th International Workshop, 2011
Proceedings of the Seventh International Conference on Mobile Ad-hoc and Sensor Networks, 2011
Proceedings of the IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, 2011
Proceedings of the IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, 2011
Proceedings of the IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, 2011
Proceedings of the IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, 2011
RNA-Seq based discovery and reconstruction of unannotated transcripts in partially annotated genomes.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011
2010
A 3/2-Approximation Algorithm for Generalized Steiner Trees in Complete Graphs with Edge Lengths 1 and 2.
Proceedings of the Algorithms and Computation - 21st International Symposium, 2010
Fixed-Parameter Tractable Combinatorial Algorithms for Metabolic Networks Alignments.
Proceedings of the ICDMW 2010, 2010
Proceedings of the ICDMW 2010, 2010
Proceedings of the 19th ACM Conference on Information and Knowledge Management, 2010
2009
Proceedings of the Encyclopedia of Optimization, Second Edition, 2009
Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications.
IEEE ACM Trans. Comput. Biol. Bioinform., 2009
Proceedings of the Advances in Bioinformatics and Computational Biology, 2009
Proceedings of the Algorithms and Data Structures, 11th International Symposium, 2009
Proceedings of the Bioinformatics Research and Applications, 5th International Symposium, 2009
Proceedings of the Global Communications Conference, 2009. GLOBECOM 2009, Honolulu, Hawaii, USA, 30 November, 2009
2008
Proceedings of the Handbook of Algorithms for Physical Design Automation., 2008
IEEE ACM Trans. Comput. Biol. Bioinform., 2008
Design and Validation of Methods Searching for Risk Factors in Genotype Case-Control Studies.
J. Comput. Biol., 2008
1.25 Approximation Algorithm for the Steiner Tree Problem with Distances One and Two.
Electron. Colloquium Comput. Complex., 2008
A Factor 3/2 Approximation for Generalized Steiner Tree Problem with Distances One and Two
CoRR, 2008
Proceedings of the Bioinformatics Research and Applications, 2008
Proceedings of the 2008 IEEE International Conference on Bioinformatics and Biomedicine, 2008
2007
Proceedings of the Handbook of Approximation Algorithms and Metaheuristics., 2007
Proceedings of the Handbook of Approximation Algorithms and Metaheuristics., 2007
Proceedings of the Handbook of Approximation Algorithms and Metaheuristics., 2007
Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications.
IEEE ACM Trans. Comput. Biol. Bioinform., 2007
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2007
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2007
Energy Efficient Node Caching and Load Balancing Enhancement of Reactive Ad Hoc Routing Protocols.
J. Univers. Comput. Sci., 2007
Selected Papers from the 1st ACIS International Workshop on Self-Assembling Wireless Networks.
J. Univers. Comput. Sci., 2007
A Novel Method for Signal Transduction Network Inference from Indirect Experimental Evidence.
J. Comput. Biol., 2007
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2007
Homomorphisms of Multisource Trees into Networks with Applications to Metabolic Pathways.
Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007
Discrete Methods for Association Search and Status Prediction in Genotype Case-Control Studies.
Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007
2006
Proceedings of the Advances in Web Intelligence and Data Mining, 2006
Power Efficient Range Assignment for Symmetric Connectivity in Static Ad Hoc Wireless Networks.
Wirel. Networks, 2006
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2006
MLR-tagging: informative SNP selection for unphased genotypes based on multiple linear regression.
Bioinform., 2006
Proceedings of the Algorithms in Bioinformatics, 6th International Workshop, 2006
Proceedings of the Seventh International Conference on Software Engineering, 2006
Proceedings of the Seventh International Conference on Software Engineering, 2006
Proceedings of the 2006 International Conference on Computer-Aided Design, 2006
Proceedings of the Computational Science, 2006
Proceedings of the Computational Science, 2006
Proceedings of the 2006 IEEE International Conference on Granular Computing, 2006
Proceedings of the 2006 IEEE International Conference on Granular Computing, 2006
Proceedings of the 2006 IEEE International Conference on Granular Computing, 2006
Proceedings of the 28th International Conference of the IEEE Engineering in Medicine and Biology Society, 2006
Proceedings of the 28th International Conference of the IEEE Engineering in Medicine and Biology Society, 2006
Proceedings of the Computer Science, 2006
2005
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2005
Int. J. Bioinform. Res. Appl., 2005
Algorithmica, 2005
Proceedings of the IEEE Wireless Communications and Networking Conference, 2005
Proceedings of the 6th ACIS International Conference on Software Engineering, 2005
Proceedings of the IEEE 2nd International Conference on Mobile Adhoc and Sensor Systems, 2005
Proceedings of the Computational Science, 2005
Proceedings of the 2005 Design, 2005
2004
Mob. Networks Appl., 2004
Proceedings of the 2004 IEEE Wireless Communications and Networking Conference , 2004
Proceedings of the Algorithms in Bioinformatics, 4th International Workshop, 2004
SyD: A Middleware Testbed for Collaborative Applications over Small Heterogeneous Devices and Data Stores.
Proceedings of the Middleware 2004, 2004
Proceedings of the 2004 International Symposium on Physical Design, 2004
Proceedings of the 2004 11th IEEE International Conference on Electronics, 2004
2003
Minimum buffered routing with bounded capacitive load for slew rate and reliability control.
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2003
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2003
Proceedings of the 2003 IEEE Wireless Communications and Networking, 2003
Proceedings of the Algorithms and Data Structures, 8th International Workshop, 2003
Proceedings of the Sventh Annual International Conference on Computational Biology, 2003
Proceedings of the 21st International Conference on Computer Design (ICCD 2003), 2003
Proceedings of the 2003 International Conference on Computer-Aided Design, 2003
Proceedings of the Global Telecommunications Conference, 2003
Proceedings of the Algorithms, 2003
Proceedings of the 2003 Design, 2003
Toward an Easy Programming Environment for Implementing Mobile Applications: A Fleet Application Case Study using SyD Middleware.
Proceedings of the 27th International Computer Software and Applications Conference (COMPSAC 2003): Design and Assessment of Trustworthy Software-Based Systems, 2003
Proceedings of the 2003 Asia and South Pacific Design Automation Conference, 2003
2002
Provably good global buffering by generalized multiterminalmulticommodity flow approximation.
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2002
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2002
Comput. Sci. J. Moldova, 2002
Proceedings of the Algorithms in Bioinformatics, Second International Workshop, 2002
Floorplan Evaluation with Timing-Driven Global Wireplanning, Pin Assignment and Buffer/Wire Sizing.
Proceedings of the 7th Asia and South Pacific Design Automation Conference (ASP-DAC 2002), 2002
Proceedings of 2002 International Symposium on Physical Design, 2002
Proceedings of the Foundations of Information Technology in the Era of Networking and Mobile Computing, 2002
Auctions with Buyer Preferences.
Proceedings of the Information Systems: The e-Business Challenge, 2002
Mobile Fleet Application using Soap and System on Devices (SYD) Middleware Technologies.
Proceedings of the IASTED International Conference on Communications, 2002
2001
SIAM J. Discret. Math., 2001
Proceedings of the Algorithms and Data Structures, 7th International Workshop, 2001
Proceedings of the 2001 IEEE/ACM International Conference on Computer-Aided Design, 2001
New graph bipartizations for double-exposure, bright field alternating phase-shift mask layout.
Proceedings of ASP-DAC 2001, 2001
Proceedings of ASP-DAC 2001, 2001
2000
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2000
Optimal phase conflict removal for layout of dark field alternatingphase shifting masks.
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2000
A note on the MST heuristic for bounded edge-length Steiner trees with minimum number of Steiner points.
Inf. Process. Lett., 2000
Proceedings of the Eleventh Annual ACM-SIAM Symposium on Discrete Algorithms, 2000
Proceedings of the 2000 IEEE/ACM International Conference on Computer-Aided Design, 2000
Proceedings of the 37th Conference on Design Automation, 2000
1999
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 1999
IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 1999
The T-join Problem in Sparse Graphs: Applications to Phase Assignment Problem in VLSI Mask Layout.
Proceedings of the Algorithms and Data Structures, 6th International Workshop, 1999
Proceedings of the 12th International Conference on VLSI Design (VLSI Design 1999), 1999
Optimal phase conflict removal for layout of dark field alternating phase shifting masks.
Proceedings of the 1999 International Symposium on Physical Design, 1999
Proceedings of the 1999 IEEE/ACM International Conference on Computer-Aided Design, 1999
Proceedings of the 1999 Conference on Asia South Pacific Design Automation, 1999
Proceedings of the 1999 Conference on Asia South Pacific Design Automation, 1999
1998
Proceedings of the 1998 International Symposium on Physical Design, 1998
Proceedings of the 1998 Design, 1998
1997
Electron. Colloquium Comput. Complex., 1997
Electron. Colloquium Comput. Complex., 1997
Discret. Comput. Geom., 1997
Algorithmica, 1997
Proceedings of the 1997 International Symposium on Physical Design, 1997
1995
Electron. Colloquium Comput. Complex., 1995
1.757 and 1.267 - Approximation Algorithms for the Network and Rectilinear Steiner Tree Problems
Electron. Colloquium Comput. Complex., 1995
Proceedings of the Algorithms and Computation, 6th International Symposium, 1995
1994
Proceedings of the Algorithms, 1994
1993
Inf. Process. Lett., 1993
An approximation algorithm for weighted itk-polymatroids and the Steiner tree problem in graphs.
Proceedings of the 3rd Integer Programming and Combinatorial Optimization Conference, Erice, Italy, April 29, 1993