Myles J. Lewis

According to our database, Myles J. Lewis authored at least 11 papers between 2020 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

ProtoPathway: Biologically Structured Prototype-Pathway Fusion for Multimodal Cancer Survival Prediction.

Amaya Gallagher-Syed, Costantino Pitzalis, Myles J. Lewis, Michael R. Barnes, Gregory Slabaugh

CoRR, May, 2026

2025

OpenUS: A Fully Open-Source Foundation Model for Ultrasound Image Analysis via Self-Adaptive Masked Contrastive Learning.

Xiaoyu Zheng, Xu Chen, Awais Rauf, Qifan Fu, Benedetta Monosi, Felice Rivellese, Myles J. Lewis, Shaogang Gong, Gregory G. Slabaugh

CoRR, November, 2025

BioX-CPath: Biologically-driven Explainable Diagnostics for Multistain IHC Computational Pathology.

Amaya Gallagher-Syed, Henry Senior, Omnia Alwazzan, Elena Pontarini, Michele Bombardieri, Costantino Pitzalis, Myles J. Lewis, Michael R. Barnes, Luca Rossi, Gregory G. Slabaugh

Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2025

2024

Going Beyond H&E and Oncology: How Do Histopathology Foundation Models Perform for Multi-stain IHC and Immunology?

Amaya Gallagher-Syed, Elena Pontarini, Myles J. Lewis, Michael R. Barnes, Gregory G. Slabaugh

CoRR, 2024

shinyExprPortal: a configurable 'shiny' portal for sharing analysis of molecular expression data.

Rafael Henkin, Katriona Goldmann, Myles J. Lewis, Michael R. Barnes

Bioinform., 2024

2023

DEGGs: an R package with shiny app for the identification of differentially expressed gene-gene interactions in high-throughput sequencing data.

Elisabetta C. Sciacca, Salvatore Alaimo, Gianmarco Silluzio, Alfredo Ferro, Vito Latora, Costantino Pitzalis, Alfredo Pulvirenti, Myles J. Lewis

Bioinform., April, 2023

MUSTANG: Multi-Stain Self-Attention Graph Multiple Instance Learning Pipeline for Histopathology Whole Slide Images.

Amaya Gallagher-Syed, Luca Rossi, Felice Rivellese, Costantino Pitzalis, Myles J. Lewis, Michael R. Barnes, Gregory G. Slabaugh

CoRR, 2023

Automated segmentation of rheumatoid arthritis immunohistochemistry stained synovial tissue.

Amaya Gallagher-Syed, Abbas Khan, Felice Rivellese, Costantino Pitzalis, Myles J. Lewis, Gregory G. Slabaugh, Michael R. Barnes

CoRR, 2023

BBmix: a Bayesian beta-binomial mixture model for accurate genotyping from RNA-sequencing.

Elena Vigorito, Anne Barton, Costantino Pitzalis, Myles J. Lewis, Chris Wallace

Bioinform., 2023

Multi-Stain Self-Attention Graph Multiple Instance Learning Pipeline for Histopathology Whole Slide Images.

Amaya Gallagher-Syed, Luca Rossi, Felice Rivellese, Costantino Pitzalis, Myles J. Lewis, Michael R. Barnes, Gregory G. Slabaugh

Proceedings of the 34th British Machine Vision Conference 2023, 2023

2020

Spectrum: fast density-aware spectral clustering for single and multi-omic data.

Christopher R. John, David S. Watson, Michael R. Barnes, Costantino Pitzalis, Myles J. Lewis

Bioinform., 2020