Nicholas A. Bokulich

According to our database, Nicholas A. Bokulich authored at least 5 papers between 2018 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

Reproducible acquisition, management and meta-analysis of nucleotide sequence (meta)data using q2-fondue.

Michal Ziemski, Anja Adamov, Lina Kim, Lena Flörl, Nicholas A. Bokulich

Bioinform., November, 2022

Multi-omics data integration reveals metabolome as the top predictor of the cervicovaginal microenvironment.

Nicholas A. Bokulich, Pawel Laniewski, Anja Adamov, Dana M. Chase, J. Gregory Caporaso, Melissa M. Herbst-Kralovetz

PLoS Comput. Biol., 2022

2021

RESCRIPt: Reproducible sequence taxonomy reference database management.

Michael S. Robeson II, Devon R. O'Rourke, Benjamin D. Kaehler, Michal Ziemski, Matthew R. Dillon, Jeffrey T. Foster, Nicholas A. Bokulich

PLoS Comput. Biol., 2021

Experiences and lessons learned from two virtual, hands-on microbiome bioinformatics workshops.

Matthew R. Dillon, Evan Bolyen, Anja Adamov, Aeriel Belk, Emily Borsom, Zachary Burcham, Justine W. Debelius, Heather Deel, Alex Emmons, Mehrbod Estaki, Chloe Herman, Christopher R. Keefe, Jamie T. Morton, Renato R. M. Oliveira, Andrew Sanchez, Anthony Simard, Yoshiki Vazquez-Baeza, Michal Ziemski, Hazuki E. Miwa, Terry A. Kerere, Carline Coote, Richard Bonneau, Rob Knight, Guilherme Oliveira, Piraveen Gopalasingam, Benjamin D. Kaehler, Emily K. Cope, Jessica L. Metcalf, Michael S. Robeson II, Nicholas A. Bokulich, J. Gregory Caporaso

PLoS Comput. Biol., 2021

2018

q2-sample-classifier: machine-learning tools for microbiome classification and regression.

Nicholas A. Bokulich, Matthew R. Dillon, Evan Bolyen, Benjamin D. Kaehler, Gavin A. Huttley, J. Gregory Caporaso

J. Open Source Softw., 2018