Paulo C. T. Souza

According to our database, Paulo C. T. Souza authored at least 8 papers between 2017 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Systematic Approach to Parametrization of Disaccharides for the Martini 3 Coarse-Grained Force Field.

Astrid F. Brandner, Iain Peter Shand Smith, Siewert J. Marrink, Paulo C. T. Souza, Syma Khalid

J. Chem. Inf. Model., 2025

Creating Coarse-Grained Systems with COBY: Toward Higher Accuracy of Complex Biological Systems.

Mikkel D. Andreasen, Paulo C. T. Souza, Birgit Schiøtt, Lorena Zuzic

J. Chem. Inf. Model., 2025

2023

Rational Prediction of PROTAC-Compatible Protein-Protein Interfaces by Molecular Docking.

Gilberto Pereira, Brian Jiménez-García, Riccardo Pellarin, Guillaume Launay, Sangwook Wu, Juliette Martin, Paulo C. T. Souza

J. Chem. Inf. Model., November, 2023

Automatic Optimization of Lipid Models in the Martini Force Field Using <i>SwarmCG</i>.

Charly Empereur-mot, Kasper B. Pedersen, Riccardo Capelli, Martina Crippa, Cristina Caruso, Mattia Perrone, Paulo C. T. Souza, Siewert J. Marrink, Giovanni M. Pavan

J. Chem. Inf. Model., June, 2023

Facilitating CG Simulations with MAD: The MArtini Database Server.

Cécile Hilpert, Louis Beranger, Paulo C. T. Souza, Petteri A. Vainikka, Vincent Nieto, Siewert J. Marrink, Luca Monticelli, Guillaume Launay

J. Chem. Inf. Model., February, 2023

2022

Martinize2 and Vermouth: Unified Framework for Topology Generation.

Peter C. Kroon, Fabian Grünewald, Jonathan Barnoud, Marco van Tilburg, Paulo C. T. Souza, Tsjerk A. Wassenaar, Siewert-Jan Marrink

CoRR, 2022

2018

High performance collision cross section calculation - HPCCS.

Leandro Zanotto, Gabriel Heerdt, Paulo C. T. Souza, Guido Araujo, Munir S. Skaf

J. Comput. Chem., 2018

2017

CHARMM-GUI Martini Maker for modeling and simulation of complex bacterial membranes with lipopolysaccharides.

Pin-Chia Hsu, Bart M. H. Bruininks, Damien Jefferies, Paulo C. T. Souza, Jumin Lee, Dhilon S. Patel, Siewert J. Marrink, Yifei Qi, Syma Khalid, Wonpil Im

J. Comput. Chem., 2017