Yifei Qi

According to our database, Yifei Qi authored at least 32 papers between 2012 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Evaluation of sequence-based predictors for phase-separating protein.

Shaofeng Liao, Yujun Zhang, Yifei Qi, Zhuqing Zhang

Briefings Bioinform., July, 2023

2022

HergSPred: Accurate Classification of hERG Blockers/Nonblockers with Machine-Learning Models.

Xudong Zhang, Jun Mao, Min Wei, Yifei Qi, John Z. H. Zhang

J. Chem. Inf. Model., 2022

HobPre: accurate prediction of human oral bioavailability for small molecules.

Min Wei, Xudong Zhang, Xiaolin Pan, Bo Wang, Changge Ji, Yifei Qi, John Z. H. Zhang

J. Cheminformatics, 2022

Long-distance random fiber laser sensing system with ultra-fast signal demodulation.

Shengtao Lin, Zinan Wang, Yifei Qi, Yunjiang Rao

Proceedings of the Optical Fiber Communications Conference and Exhibition, 2022

2021

CHARMM-GUI Supports Hydrogen Mass Repartitioning and Different Protonation States of Phosphates in Lipopolysaccharides.

Ya Gao, Jumin Lee, Iain Peter Shand Smith, Hwayoung Lee, Seonghoon Kim, Yifei Qi, Jeffery B. Klauda, Göran Widmalm, Syma Khalid, Wonpil Im

J. Chem. Inf. Model., 2021

2020

Stealthy Actuator Signal Attacks in Stochastic Control Systems: Performance and Limitations.

Chongrong Fang, Yifei Qi, Jiming Chen, Rui Tan, Wei Xing Zheng

IEEE Trans. Autom. Control., 2020

An Event-Based Stealthy Attack on Remote State Estimation.

Peng Cheng, Zeyu Yang, Jiming Chen, Yifei Qi, Ling Shi

IEEE Trans. Autom. Control., 2020

LLPSDB: a database of proteins undergoing liquid-liquid phase separation in vitro.

Qian Li, Xiaojun Peng, Yuanqing Li, Wenqin Tang, Jia'an Zhu, Jing Huang, Yifei Qi, Zhuqing Zhang

Nucleic Acids Res., 2020

DenseCPD: Improving the Accuracy of Neural-Network-Based Computational Protein Sequence Design with DenseNet.

Yifei Qi, John Z. H. Zhang

J. Chem. Inf. Model., 2020

CHARMM-GUI DEER facilitator for spin-pair distance distribution calculations and preparation of restrained-ensemble molecular dynamics simulations.

Yifei Qi, Jumin Lee, Xi Cheng, Rong Shen, Shahidul M. Islam, Benoît Roux, Wonpil Im

J. Comput. Chem., 2020

Optimal periodic watermarking schedule for replay attack detection in cyber-physical systems.

Chongrong Fang, Yifei Qi, Peng Cheng, Wei Xing Zheng

Autom., 2020

2019

Event-Based State Estimation: Optimal Algorithm With Generalized Closed Skew Normal Distribution.

Lidong He, Jiming Chen, Yifei Qi

IEEE Trans. Autom. Control., 2019

Study of SHMT2 Inhibitors and Their Binding Mechanism by Computational Alanine Scanning.

Liping He, Jingxiao Bao, Yunpeng Yang, Suzhen Dong, Lujia Zhang, Yifei Qi, John Z. H. Zhang

J. Chem. Inf. Model., 2019

DeepDDG: Predicting the Stability Change of Protein Point Mutations Using Neural Networks.

Huali Cao, Jingxue Wang, Liping He, Yifei Qi, John Z. H. Zhang

J. Chem. Inf. Model., 2019

CHARMM-GUI Nanodisc Builder for modeling and simulation of various nanodisc systems.

Yifei Qi, Jumin Lee, Jeffery B. Klauda, Wonpil Im

J. Comput. Chem., 2019

Calculation of hot spots for protein-protein interaction in p53/PMI-MDM2/MDMX complexes.

Dading Huang, Yifei Qi, Jianing Song, John Z. H. Zhang

J. Comput. Chem., 2019

2018

DoS Attack Energy Management Against Remote State Estimation.

Heng Zhang, Yifei Qi, Junfeng Wu, Lingkun Fu, Lidong He

IEEE Trans. Control. Netw. Syst., 2018

2017

Optimal Sensor Data Scheduling for Remote Estimation Over a Time-Varying Channel.

Yifei Qi, Peng Cheng, Jiming Chen

IEEE Trans. Autom. Control., 2017

CHARMM-GUI 10 years for biomolecular modeling and simulation.

Sunhwan Jo, Xi Cheng, Jumin Lee, Seonghoon Kim, Sang-Jun Park, Dhilon S. Patel, Andrew H. Beaven, Kyu Il Lee, Huan Rui, Soohyung Park, Hui Sun Lee, Benoît Roux, Alexander D. MacKerell Jr., Jeffrey B. Klauda, Yifei Qi, Wonpil Im

J. Comput. Chem., 2017

CHARMM-GUI Martini Maker for modeling and simulation of complex bacterial membranes with lipopolysaccharides.

Pin-Chia Hsu, Bart M. H. Bruininks, Damien Jefferies, Paulo Cesar Telles de Souza, Jumin Lee, Dhilon S. Patel, Siewert J. Marrink, Yifei Qi, Syma Khalid, Wonpil Im

J. Comput. Chem., 2017

Depth map super-resolution via multiclass dictionary learning with geometrical directions.

Wei Xu, Jin Wang, Qing Zhu, Xi Wu, Yifei Qi

Proceedings of the 2017 IEEE Visual Communications and Image Processing, 2017

Cost-effective watermark based detector for replay attacks on cyber-physical systems.

Chongrong Fang, Yifei Qi, Peng Cheng, Wei Xing Zheng

Proceedings of the 11th Asian Control Conference, 2017

Optimal jamming power allocation against remote state estimation.

Heng Zhang, Yifei Qi, Junfeng Wu

Proceedings of the 2017 American Control Conference, 2017

2016

Energy-Efficient Target Tracking by Mobile Sensors With Limited Sensing Range.

Yifei Qi, Peng Cheng, Jing Bai, Jiming Chen, Adrien Guenard, Ye-Qiong Song, Zhiguo Shi

IEEE Trans. Ind. Electron., 2016

Energy-Efficient Data Forwarding for State Estimation in Multi-Hop Wireless Sensor Networks.

Peng Cheng, Yifei Qi, Kefei Xin, Jiming Chen, Lihua Xie

IEEE Trans. Autom. Control., 2016

2015

Event-based attack against remote state estimation.

Yifei Qi, Peng Cheng, Ling Shi, Jiming Chen

Proceedings of the 54th IEEE Conference on Decision and Control, 2015

2014

CHARMM-GUI PACE CG Builder for Solution, Micelle, and Bilayer Coarse-Grained Simulations.

Yifei Qi, Xi Cheng, Wei Han, Sunhwan Jo, Klaus Schulten, Wonpil Im

J. Chem. Inf. Model., 2014

CHARMM-GUI <i>Membrane Builder</i> toward realistic biological membrane simulations.

Emilia L. Wu, Xi Cheng, Sunhwan Jo, Huan Rui, Kevin C. Song, Eder M. Dávila-Contreras, Yifei Qi, Jumin Lee, Viviana Monje-Galvan, Richard M. Venable, Jeffery B. Klauda, Wonpil Im

J. Comput. Chem., 2014

ST-analyzer: A web-based user interface for simulation trajectory analysis.

Jong Cheol Jeong, Sunhwan Jo, Emilia L. Wu, Yifei Qi, Viviana Monje-Galvan, Min Sun Yeom, Lev Gorenstein, Feng Chen, Jeffery B. Klauda, Wonpil Im

J. Comput. Chem., 2014

Dynamic sensor data scheduling for remote estimation over Gilbert-Elliot channel.

Yifei Qi, Peng Cheng, Jiming Chen

Proceedings of the 2014 IEEE/CIC International Conference on Communications in China, 2014

2012

QoE Model Based Optimization for Streaming Media Service Considering Equipment and Environment Factors.

Bingjun Han, Xin Zhang, Yifei Qi, Yuehong Gao, Dacheng Yang

Wirel. Pers. Commun., 2012

A surrounding-adaptive QoE adjustment approach for optimization of capacity and quality of air interface.

Bingjun Han, Xin Zhang, Yifei Qi, Yuehong Gao, Yitong Liu, Dacheng Yang

Proceedings of the 19th International Conference on Telecommunications, 2012