Peter Minary

According to our database, Peter Minary authored at least 13 papers between 2008 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

DARTS-GT: Differentiable Architecture Search for Graph Transformers with Quantifiable Instance-Specific Interpretability Analysis.

Shruti Sarika Chakraborty, Peter Minary

CoRR, October, 2025

LLM-EmBEditor: Universal Base Editing Efficiency Prediction via Large Language Model Embeddings.

Lucas Schneider, Peter Minary

Proceedings of the 2025 9th International Conference on Computational Biology and Bioinformatics, 2025

Orthogonal Sequential Fusion in Multimodal Learning.

Sami Labbaki, Peter Minary

Proceedings of the 28th International Conference on Information Fusion, 2025

2024

Be-dataHIVE: a base editing database.

Lucas Schneider, Peter Minary

BMC Bioinform., December, 2024

CRISPR-DBA: a deep learning framework for uncertainty quantification of CRISPR off-target activities.

Xinzhe Cao, Peter Minary

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

2021

crisprSQL: a novel database platform for CRISPR/Cas off-target cleavage assays.

Florian Störtz, Peter Minary

Nucleic Acids Res., 2021

2019

HLA-DM Stabilizes the Empty MHCII Binding Groove: A Model Using Customized Natural Move Monte Carlo.

Samuel Demharter, Bernhard Knapp, Charlotte M. Deane, Peter Minary

J. Chem. Inf. Model., 2019

2018

In silico structural modeling of multiple epigenetic marks on DNA.

Konrad Krawczyk, Samuel Demharter, Bernhard Knapp, Charlotte M. Deane, Peter Minary

Bioinform., 2018

2017

DNA Sequence Complexity Reveals Structure Beyond GC Content in Nucleosome Occupancy.

Hector Zenil, Peter Minary

CoRR, 2017

2016

Tertiary Element Interaction in HIV-1 TAR.

Konrad Krawczyk, Adelene Y. L. Sim, Bernhard Knapp, Charlotte M. Deane, Peter Minary

J. Chem. Inf. Model., 2016

Exploring peptide/MHC detachment processes using hierarchical natural move Monte Carlo.

Bernhard Knapp, Samuel Demharter, Charlotte M. Deane, Peter Minary

Bioinform., 2016

2010

Conformational Optimization with Natural Degrees of Freedom: A Novel Stochastic Chain Closure Algorithm.

Peter Minary, Michael Levitt

J. Comput. Biol., 2010

2008

Dynamical Spatial Warping: A Novel Method for the Conformational Sampling of Biophysical Structure.

Peter Minary, Mark E. Tuckerman, Glenn J. Martyna

SIAM J. Sci. Comput., 2008