Peter Virnau

According to our database, Peter Virnau authored at least 14 papers between 2006 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Reconstructing diploid 3D chromatin structures from single cell Hi-C data with a polymer-based approach.

Jan Rothörl, Maarten A. Brems, Tim J. Stevens, Peter Virnau

Frontiers Bioinform., May, 2023

2018

KnotGenome: a server to analyze entanglements of chromosomes.

Joanna I. Sulkowska, Szymon Niewieczerzal, Aleksandra I. Jarmolinska, Jonathan T. Siebert, Peter Virnau, Wanda Niemyska

Nucleic Acids Res., 2018

Molecular dynamics simulations in hybrid particle-continuum schemes: Pitfalls and caveats.

S. Stalter, Leonid Yelash, N. Emamy, Antonia Statt, Martin Hanke, Mária Lukácová-Medvid'ová, Peter Virnau

Comput. Phys. Commun., 2018

2016

A Monte Carlo Study of Knots in Long Double-Stranded DNA Chains.

Florian C. Rieger, Peter Virnau

PLoS Comput. Biol., 2016

2014

How molecular knots can pass through each other.

Benjamin Trefz, Jonathan T. Siebert, Peter Virnau

Proc. Natl. Acad. Sci. USA, 2014

2013

Phase Separation of Colloid Polymer Mixtures Under Confinement.

Antonia Statt, Alexander Winkler, Peter Virnau, Kurt Binder

Proceedings of the High Performance Computing in Science and Engineering '13, 2013

2011

Monte Carlo simulations of the 2d-Ising model in the geometry of a long stripe.

D. Wilms, Anke Winkler, Peter Virnau, Kurt Binder

Comput. Phys. Commun., 2011

Monte Carlo simulations of a single polystyrene chain in spherical confinement.

Daniel Reith, Peter Virnau

Comput. Phys. Commun., 2011

2010

A Stevedore's Protein Knot.

Daniel Bölinger, Joanna I. Sulkowska, Hsiao-Ping Hsu, Leonid A. Mirny, Mehran Kardar, José N. Onuchic, Peter Virnau

PLoS Comput. Biol., 2010

Implementation and performance analysis of bridging Monte Carlo moves for off-lattice single chain polymers in globular states.

Daniel Reith, Peter Virnau

Comput. Phys. Commun., 2010

Multi-GPU accelerated multi-spin Monte Carlo simulations of the 2D Ising model.

Benjamin Block, Peter Virnau, Tobias Preis

Comput. Phys. Commun., 2010

2009

GPU accelerated Monte Carlo simulation of the 2D and 3D Ising model.

Tobias Preis, Peter Virnau, Wolfgang Paul, Johannes J. Schneider

J. Comput. Phys., 2009

2007

Protein knot server: detection of knots in protein structures.

Grigory Kolesov, Peter Virnau, Mehran Kardar, Leonid A. Mirny

Nucleic Acids Res., 2007

2006

Intricate Knots in Proteins: Function and Evolution.

Peter Virnau, Leonid A. Mirny, Mehran Kardar

PLoS Comput. Biol., 2006