Petri Törönen

Orcid: 0000-0003-4764-9790

According to our database1, Petri Törönen authored at least 19 papers between 2002 and 2022.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

Online presence:

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Bibliography

2022
Correction: Novel comparison of evaluation metrics for gene ontology classifiers reveals drastic performance differences.
PLoS Comput. Biol., 2022

2021
A New Approach to Multilabel Stratified Cross Validation with Application to Large and Sparse Gene Ontology Datasets.
CoRR, 2021

2019
Novel comparison of evaluation metrics for gene ontology classifiers reveals drastic performance differences.
PLoS Comput. Biol., 2019

2018
PANNZER2: a rapid functional annotation web server.
Nucleic Acids Res., 2018

AAI-profiler: fast proteome-wide exploratory analysis reveals taxonomic identity, misclassification and contamination.
Nucleic Acids Res., 2018

2016
Robust multi-group gene set analysis with few replicates.
BMC Bioinform., 2016

2015
PANNZER: high-throughput functional annotation of uncharacterized proteins in an error-prone environment.
Bioinform., 2015

2014
Gene set analysis: limitations in popular existing methods and proposed improvements.
Bioinform., 2014

2013
GOParGenPy: a high throughput method to generate Gene Ontology data matrices.
BMC Bioinform., 2013

2010
Heuristic Bayesian Segmentation for Discovery of Coexpressed Genes within Genomic Regions.
IEEE ACM Trans. Comput. Biol. Bioinform., 2010

2009
Interspliced transcription chimeras: Neglected pathological mechanism infiltrating gene accession queries?
J. Biomed. Informatics, 2009

Generation of Gene Ontology benchmark datasets with various types of positive signal.
BMC Bioinform., 2009

Robust extraction of functional signals from gene set analysis using a generalized threshold free scoring function.
BMC Bioinform., 2009

2006
POXO: a web-enabled tool series to discover transcription factor binding sites.
Nucleic Acids Res., 2006

Bayesian search of functionally divergent protein subgroups and their function specific residues.
Bioinform., 2006

2005
Theme discovery from gene lists for identification and viewing of multiple functional groups.
BMC Bioinform., 2005

2004
Selection of informative clusters from hierarchical cluster tree with gene classes.
BMC Bioinform., 2004

2003
Trustworthiness and metrics in visualizing similarity of gene expression.
BMC Bioinform., 2003

2002
Analysis and visualization of gene expression data using Self-Organizing Maps.
Neural Networks, 2002


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